Chelonoidis abingdonii (Abingdon island giant tortoise): 116821478
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Entry
116821478 CDS
T07367
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04519
Cadherin signaling
cabi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116821478 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116821478 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
116821478 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
PDZ domain-containing proteins
MAGUK family proteins
116821478 (PALS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116821478
NCBI-ProteinID:
XP_032630618
UniProt:
A0A8C0HG33
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All DBs
Position
4:82063531..82204236
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AA seq
675 aa
AA seq
DB search
MTTSHMNGHVTEDSDNETKNMGPASPEEPQKHREMAVDCPGDLGSRMMPVRRSAQLERIR
QQQEDMRRRREEEGKKQELDLTASMRLKKLAQIPPKTGIDNPMFDTEEGVILESPHYAVK
ILEVEELLASLKHIQHTLVDPQSQEDISLILQLVQNTDFQNAFKIHNAVTVHMNKASPPY
PLISNAQELAQEVQCVLKPSHQKDGQELSALLNAPHIQALLLAHDKVAEQEMQPEPVTNE
KVYENFGLYGGETVKIVRIEKAPDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFAAAVPHTTRSRRENEVAGRDYHFISRQAFETDI
AAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacatgttacagaagattctgacaatgaaacaaaaaat
atggggcctgcatctcctgaggaacctcagaagcacagagagatggctgttgattgccct
ggggatttggggtcaaggatgatgccagtacgacgaagtgctcaacttgagcggattcgc
cagcaacaggaggacatgaggcgcaggcgagaagaagaaggaaagaaacaagaactagac
cttactgcttcaatgaggcttaagaaactagcgcagattcctcccaaaactggaatagat
aatcctatgtttgacacagaagaaggagtcattctggagagtcctcattatgctgtaaaa
atattagaagtggaagagctgttagcttctcttaagcatatccaacacactttggtagac
ccccagagccaagaggatatctctctcattttacagcttgtccaaaatactgattttcag
aatgcatttaagatacacaatgctgtcacagtgcacatgaacaaagccagccctccgtat
cctcttatctccaatgcgcaagagctagcacaagaggtacaatgtgttttgaaacccagt
caccagaaagatgggcaggagcttagtgctttgctgaatgcccctcacattcaggcactt
ttattagctcatgataaggttgcagagcaagaaatgcagccagagccagtgacaaatgaa
aaggtttatgagaactttggcctgtatggaggggagacagtgaaaatagttcgcattgag
aaggctccagatattccattgggtgctacagttcgtaatgaaatggattctgtcatcatt
agtcgaatagtgaaagggggtgctgcagagaagagtgggttattacatgaaggggatgaa
gttctggaaattaatggcattgagattcgtggtaaagatgttaatgaagtttttgacttg
ctggctgacatgcatggcactctgacatttgtgctgatacccagtcaacagagcaagccg
cctcctgccaaggagacagttatacacgtgaaagcacattttgactatgatccttctgat
gatccttacgtaccttgccgagagttaggtctgtcttttcaaaagggagatatacttcat
gtgatcagccaagaagatccaaactggtggcaggcctaccgagatggagatgaagacaat
cagcctttggcaggccttatcccaggaaagagctttcaacagcaaagagaagcaatgaag
caaaccattgaagaagacaaggagccagagaaatcaggaaaactctggtgtgcaaagaaa
aataaaaagaaacggaaaaaagttttgtacaatgccaataaaaacgatgattatgacaat
gaagaaattttaacctatgaggaaatgtcactgtatcaccagccagcaaataggaaaagg
cccattgtcctgattggcccacagaactgcggccagaatgaactgcgtcagagactaatg
aataatgaagtagatcgctttgcagctgcagttcctcataccactcggagtaggcgagag
aatgaagtggctggcagagattaccatttcatctcacggcaggcatttgagactgacata
gctgcagggaaatttattgagcatggcgagtttgagaagaatctgtatggtaccagcata
gactctgtgcggcaagtaatcaactctgggaagatatgccttttaaatctccatacacag
tcattgaagaccctacgcaattcagacttgaaaccatatattatcttcattgcaccacct
tcgcaagagcggctacgtgctttattggccaaagagggtaaaaatccaaagccagaagaa
ctaagagaaatcatagagaagaccagagagatggaacagaacaatggccactactttgac
acagcgattgtgaattctgatcttgataaggcatatcaggagctacttcgtttaataaac
aaacttgacacagaacctcagtgggtgccatccacctggttacggtga
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