Chelonoidis abingdonii (Abingdon island giant tortoise): 116821654
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Entry
116821654 CDS
T07367
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi02010
ABC transporters
cabi04145
Phagosome
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116821654
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116821654
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116821654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabi02000
]
116821654
Enzymes [BR:
cabi01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
116821654
Transporters [BR:
cabi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
116821654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_30
SRP54
AAA_22
AAA_15
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
116821654
NCBI-ProteinID:
XP_032630901
Ensembl:
ENSCABG00000006743
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MPLPLTLRLGCPLLLCDLVLLTLLGWGVPSLAPLGLPATWLEAAVRFLGLWGVWGLLAPD
RPHLSPPRALAALCLLPPLYLTLRSCLPLPDMPPALLAGAPWAWLLLSYGAMGLAQLTWG
ALGQGDRAGGPRAEDTERESRATLRRLVELSRPDLPFLSGAFIVLTLGVIGEMFIPYYTG
RVIDILGSSYGPAFTTAIVLMGLTSFGSSLAASCREGLFMFTLSRLNIRIRQLLFSSLVR
QELAFFQQVKTGDLTSRLSKDTTMMSRSVPANANIFLCSLVKALGLYGFMLGLSWRLTLL
TLIEMPLTMAAQNLYNARHQAVLRAIQDSMAHSSEIVRESVSSIETVRSFATEEEESQRY
KAALAKTHQLKKRHNLERELYLLFCQLLHLAVQALMLYCGYQQICAGLLTKGSLVSFILY
QWDAGGCVKTLACTFEDLLSNVGAAEKVFEYLDREPAVRTNGTRAPELLQGHVSFRNVSF
SYPFRPDRQVLKAVSFELRPGEVTALVGLNGSGKTTCVGLLERFYEPQAGEILLDGAPIR
EYDHRYLHRQVALVGQEPVLFSGSIRENIAYGLGGCGEEQVTRAARAAHASGFIMELDSG
FETDVGEKGGQLSAGQKQRIAIARALIRQPAVLILDEATSALDTESECAIHQSVLSQGPW
TVLVIAHRMQTVENADRIVVLEGGAVAEEGTHAELMGRKGPYYRLVQRDLAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcccctcaccctgcgtctgggctgccccctgctgctctgtgatctggtcctg
ctgaccctgctgggctggggcgtcccctcgctggcccccctggggctgccggccacctgg
ctggaagctgctgtgcgtttcctggggctctggggggtctgggggctgctggccccagat
cggccccacctgtccccccccagggccctggctgccctgtgcctgctgccccccctgtat
ctcaccctgcggagctgcctgcccctgcccgacatgccccccgccctgctggctggtgcc
ccctgggcctggctgctgctgagctatggggcaatggggctggcccagctcacctggggg
gctctggggcagggagacagggctggggggcctcgtgctgaggacacagagcgggagtcc
agggctaccctgcgccggctggtggagctgtcccggcctgacctgcccttcctgtccggg
gccttcatcgtcctcaccctgggtgtgattggtgagatgttcatcccctactacacggga
cgtgtcatcgacatcttgggcagcagctacggccccgccttcaccaccgccatcgtcctc
atgggcctgacctcctttggcagctccctggctgccagctgccgcgaggggctcttcatg
ttcacgctctcccggcttaacatccgcatccgccagctcctcttctcctccctggtgcgc
caggagctggccttcttccagcaggtcaaaacaggggacctgacctcgcgcctctccaag
gacaccaccatgatgagccgctcagtgccggccaacgccaacatcttcctgtgcagcctg
gtgaaggcgctggggctgtacggcttcatgctggggctgtcctggcgcctgacgctgctc
acgctcattgagatgcccctcaccatggccgcccagaacctctacaatgcccgacaccag
gccgtgctgagggcgatccaggactccatggcgcactccagcgagattgtgcgtgagtcg
gtctcctccatcgagactgtgcgcagcttcgccaccgaggaggaggagtcgcagcgctac
aaggcagcactggccaagacccaccagctgaaaaagcgccacaatctggagagagagctc
tacctgctcttctgccagctgctgcatctggccgtgcaggcgctgatgctgtactgcggg
taccagcagatctgtgccgggctcctgaccaagggcagcctggtctccttcatcctctac
cagtgggatgcagggggctgcgttaagaccctggcgtgcacctttgaggacctgctgagc
aatgtgggggcggcggagaaggtgttcgaatatctggaccgggagccggccgtgcgcacc
aacgggacgcgggcaccggagttgctgcagggacacgtctccttccgcaacgtctccttc
tcctaccccttccgcccggaccgccaggtcctaaaggctgtgtccttcgagctgcgccct
ggggaggtgacagcgctggtggggctgaacggcagcgggaagaccacttgtgtggggttg
ctggagcggttctatgaaccccaggccggggagatcctgctggacggggcccccatccgg
gaatacgatcaccggtacctgcaccgccaggtggccctggtggggcaggagcctgtcctc
ttctctggctccatccgggagaacatcgcttacgggctggggggctgcggggaggagcag
gtcaccagggcggccagagcggcccatgcctccggattcatcatggagctggacagcggc
tttgagacagatgtgggggagaagggtgggcagctctcggcggggcagaagcagcggatc
gccattgcccgggcgctgatccgccagccggccgtgctgatcctggacgaagccaccagc
gcgctggacacggagagcgaatgcgcgatccaccagtcggtgctgagccaggggccctgg
acggtgctggtgatcgcccaccgcatgcagacagtggagaacgctgaccggatcgtggtg
ctggagggcggggctgtggcagaggaggggacgcatgccgagctgatggggcgcaaaggc
ccctactacagactggtgcagagagacctggccgagtaa
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