Chelonoidis abingdonii (Abingdon island giant tortoise): 116821662
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Entry
116821662 CDS
T07367
Name
(RefSeq) antigen-presenting glycoprotein CD1d-like
KO
K06448
T-cell surface glycoprotein CD1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116821662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cabi04090
]
116821662
CD molecules [BR:
cabi04090
]
Proteins
116821662
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_I_3
C1-set
MHC_I
C2-set_3
LRRCT_2
Ig_2
C2-set_2
Motif
Other DBs
NCBI-GeneID:
116821662
NCBI-ProteinID:
XP_032630914
LinkDB
All DBs
Position
12:954489..961533
Genome browser
AA seq
408 aa
AA seq
DB search
MWVTPGPSSRCPDACHSPDPPSLARMLLPLLLLLWAWGALAASPHLPPASLTLRVLKTTV
FHNASSTEVAGMALLGDLETHSLACSTCEIRFLQPWAQQGLTPKQWQDLELLIHRSLADF
IRLVNKVVQDEGGGYPFVTQISFSCELHPNGTSRRLCDVAVHGEDFISLDMDTGKWVTPY
GEKLGSYIQDLVNQDRSISTLFSFLRRTTCLYGINIVAQYGRESLERQERPVAVVFARAP
PPAGTPALVLLVCRVTGFYPRPVHVAWLQDGKEVTPGWWLNSSGILPNADLTYQLRSSLA
VGPGTGHSYACRVQHSSLGGQSLLIPWEQSRPWGPGWAVGITLGVLAVAAMAVVLWRSRR
RGYQDVRPGESSASGDGTGPGVGTSPSPGDMDLGNRSAPGSRAEGPED
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaccccgggtccctcgtcccgctgccctgacgcctgccacagcccggatccc
ccttcccttgccaggatgctgctccctctgctgctcctcctctgggcatggggggccctg
gccgcctcccctcatctccccccagcatctctcaccctccgggtgcttaaaaccaccgtc
ttccacaacgccagctccacggaagtggcggggatggccctgctgggcgacctggagacc
cactccctggcctgcagcacctgcgagatccgcttcctgcagccctgggcccagcagggc
ctgaccccaaagcagtggcaggacctggagctgctgatccatcgctccctggccgacttc
atccgtctggtgaacaaagtggttcaggatgaaggaggaggctacccctttgttacccag
atctccttcagctgcgagctgcaccccaacggcacctcgaggcgactctgtgacgttgcg
gtgcatggcgaggacttcatcagcttggacatggacacaggcaaatgggtcactccgtat
ggggagaagctggggagctacatccaggatcttgtcaaccaggataggagcatatccacc
ctgttttcgtttctccggagaacaacgtgtctttacgggatcaatatcgttgcccagtat
gggagagagtctctggagaggcaagagcgtccggtcgctgtggtgtttgcccgagcgcct
cccccagccgggacccccgcgctggtactgctggtttgccgggtcaccggtttctacccc
cggcccgtccacgtggcctggctgcaggacgggaaggaggtgacaccaggctggtggctg
aactccagcgggatcctgcccaatgcggacctgacctaccagctgcgcagctccctggcc
gtggggccgggcaccgggcacagctacgcctgccgggtgcagcacagcagcctggggggc
cagagcctgctgatcccctgggagcagagcaggccctggggccccggctgggccgtgggc
atcaccctgggggttctggccgtagccgccatggccgtggtgctgtggcggagcagacgc
aggggctaccaggacgttagaccaggggagtccagcgcctcaggggacggcaccggacca
ggtgtggggaccagcccctctcctggggacatggaccttgggaatcgatctgcgccaggc
tccagagctgagggtcccgaggactga
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