Chelonoidis abingdonii (Abingdon island giant tortoise): 116821739
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Entry
116821739 CDS
T07367
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116821739 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cabi01009
]
116821739 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116821739 (PCDH20)
Protein phosphatases and associated proteins [BR:
cabi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116821739 (PCDH20)
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116821739 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
ORF45
Motif
Other DBs
NCBI-GeneID:
116821739
NCBI-ProteinID:
XP_032631033
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MTAVSVGMNYQGTGRRSQALGTSWLPRSRHRQLEMGHLRSARRTTSHRNLQHLFLFLLFI
GPFNCFASYSRATELFYSLNEGLPAGVLIGSLAQDLRLHGVAAEGPPTRRGEPALSFSLA
SQGLGGQYVSLDNRSGELHTSALQIDREALCLETGAGSPASLPAPSSEPCLLLLDVLVLP
QEHFRLVKVKIAIRDVNDNAPRFPVPNMRLWVPENAPVDTRLAIEHPALDPDLGTNAVQT
YRLQDNYGVFTLDVEENESGERTPYLIVMGALDREDREEYVTLIIAEDGGTPPLLGSATL
IIGISDINDNCPQFSDSQLNVTIYGNSSAGTHVATTHAVDMDLGSNAQISYSYSQKVPQP
SKDLFHLDESTGAIKLSSKIDGDAPRLHRLTVLANGPGCIPAVITVLVSIIKVMLRPPEV
VPRFIANEVEGVVYLKELEPVNTPIAFFTIKDPDEKYKVDCFLDGNGPFKLSPYKPYNNE
YLLETTRPLDYEVQQLYQISVVAWNSEGFHVNKIIKVQVLDDNDNSPVFPQQLIELSIEE
NNAPNAFLTKLHATDADSGERGKVSYFLGPDAPSYFSLDKTTGVLTVSTQLDREEKEKYR
YTVKAIDSGLPPRESIATVIITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDA
DSGQNGWVALSVVNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWVEAVDGGDPALSSTA
KITVLLLDINDNPPLVLFPQSNTSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIG
RRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDT
VSNESYIESLLRKEPDINIEEKEPQISIEPTHKKMESPSCVPTLVALSIISLGSITLVTG
MGIYICLWKGKKHHSADENLEVQIPLNGRIDLHMLEKKPVEISNI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtttcagtgggaatgaactaccaagggactggcaggcgctcgcaagccctc
ggaacaagctggcttccgagaagcaggcaccggcagctggagatggggcacctacgcagc
gctaggcgcaccaccagccacagaaacctgcagcatttgttccttttcctgctcttcatc
ggccctttcaactgctttgccagttacagccgtgccaccgagctcttctacagcctcaac
gaggggctgccagccggagtgctcatcgggagcctggcacaggacctacggctacatggg
gtggctgcagaggggccgccgacccgtcgtggagagccagcgctgtccttcagcctggcc
tcccagggactgggtggccaatatgtgagcctagacaaccgctcgggggagctgcacacc
tcagccctgcagattgaccgtgaggcactgtgcctagagaccggtgctggctcacctgcc
tctctgccggcgccatcctcggagccctgcctgctgctgctggatgtgctggtgctgccc
caggagcacttccgcctagtgaaggtgaagatcgccattcgcgatgtcaatgacaatgcg
ccacgattccctgtgcccaacatgcgcctctgggtacccgaaaatgcccctgtcgacacc
cgcctggccatagagcacccagccctcgaccctgacctgggcaccaatgcagtccagacc
taccgccttcaggataactatggggtcttcaccctagatgtggaggagaatgagagtggg
gagaggaccccctacctgattgttatgggggctctggacagggaggacagggaggagtat
gtcaccctcatcatcgcggaggatggggggaccccgccattgctgggcagtgccaccctc
atcattggcatcagtgacatcaatgacaactgcccccagttcagtgattctcaactcaac
gtcaccatctatgggaattccagtgcagggacacatgtggccaccacccacgcagttgac
atggacttgggatccaatgcccagatctcttactcttacagtcaaaaggtcccccagcca
tcaaaagacttgttccatctggacgaaagtacaggagccatcaagctctccagtaagatt
gatggtgatgctccccgcctccataggttgactgtattggccaacggtcctggttgtatc
cctgctgtgatcactgtgctggtgtccatcatcaaagtcatgttgagaccccctgaagtg
gtccctcgttttatagctaatgaagtagaaggtgtggtttacttgaaagaactggaacct
gttaacacaccaatagcattttttactataaaagacccagacgaaaaatataaagtggat
tgctttttggatggcaatgggccattcaaactgtcaccatacaaaccatacaataatgaa
tatttattagagactacaaggcctttagactatgaggtgcagcagctctatcaaatatca
gtggttgcatggaactcagagggatttcatgtaaacaagataattaaagtgcaggttctg
gacgataatgacaactcaccagttttccctcaacaattaatagaattatctattgaagaa
aataatgcacccaatgcttttttgaccaaattgcatgcaacagatgctgacagtggagag
agagggaaagtgtcctattttctaggacctgatgccccttcatatttttctttagataag
actacaggtgttcttacagtttccactcagctggacagagaagaaaaagagaaatacaga
tatactgttaaagcaatagattctggattgcctcccagagaatcgatagcaactgtcatc
atcacagtgttggataaaaatgacaatagtcctagatttatcaataaggatttcagtttt
tttgtaccagaaaacttcccaggttttggggaaattggagttatcagtgttacagatgct
gattcagggcaaaatggatgggtagccctttcagttgtaaatggaagtgatatttttgtg
atagatactggcaaaggagttttgagagctaaggtctccctcgacagggagcagcaaagt
tcctatgtcttgtgggttgaagctgttgatggaggagaccctgccctttcttctactgcc
aaaataactgtccttcttctggacattaatgacaaccccccactggtcttgtttcctcag
tctaatacgtcttatttgttggtacttccttctactcttcctggctctcccatcacagaa
gtctatgccgtagataaagacactggcatgaatgctgtcatagcttacagcatcataggt
agaagaggtccacgacctgagtcatttaggattgaccctaaaactggaaatatcaccttg
gaagagtcactgatgcagaacgactatggtctctaccgactactggtaaaagttagcgat
catggctatccagagcccctccattccacagtcatggtgaacctttttgtcaacgacaca
gtgagcaatgagagttatattgaaagtttgttaagaaaggaacctgacattaatatagaa
gaaaaagagccacaaatatctatagagcctacacataaaaaaatggagtcaccatcttgc
gtgcctaccttagtagccctgtcaataataagcttgggatcaatcactttagtaactggg
atgggcatttacatctgtttatggaaagggaaaaagcatcacagtgcagatgaaaatttg
gaagtacaaatcccactaaatggaagaattgatcttcatatgttggagaagaaaccagtg
gagatttctaatatttga
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