Chelonoidis abingdonii (Abingdon island giant tortoise): 116821893
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Entry
116821893 CDS
T07367
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi00310
Lysine degradation
cabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116821893 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116821893 (PRDM2)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116821893 (PRDM2)
Enzymes [BR:
cabi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
116821893 (PRDM2)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116821893 (PRDM2)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116821893 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2H2_11
zf-C2HC_2
PyrI_C
Motif
Other DBs
NCBI-GeneID:
116821893
NCBI-ProteinID:
XP_032631258
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MNQNTTESAGAAETLADVPEHVLKGLPEEVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKNNVFMWEVYYPNLGWMCVDATDPRKGNWLRYVNWALSGKEQNLFPLEINR
TIYYKTLKPIEPGEELLVWYNGEDNPEIAAAIEEERAAHRSKKHSPKAKKGKKKECKNKR
KKAIDTKPRKTDLDFASTDMRESKEDRKEEDEKPSVSAVLSLEQTAVIQEMVNQDVLPKL
MIPSPTSEPRTMPEDKPGAITCGSDDLEEEEEEEEEEEDEEEVEDANLPEESPGKEPTAI
CEEKLESMEEQISISEESLESSPKKTPVVKIPKAKGVSNGDLQETFMFPCQHCERKFTTK
QGLERHMHIHISSVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPLTLTSAPQSDDV
ADGQTFADDGLKDELNISNPVQDFAVLDSEKVSQEMSNSTLVENKEPKELHPCKYCKKVF
GTHTNMRRHQRRVHERHLIPKGVRRKGFILEEPQLQTEQAQPAQSVYIASTELEEDGEAD
DIYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIEMESNSADLYGINCLLSPVTVEISQ
NLKSTQTHMTDLPKEPSSGGSSESKKRRTTSPPLLPKIKTEIDPEPITPSCSLNLPLSIS
TAESLTFHKEKSVYLSSKLKQLLQTQDSNKITQAATEIPKLGPSATSSPILPSVSSRFKR
RTSSPPSSPQHSPALRDFGKQGDGKTTWSDTVLGSKMPKLGSHSNSPVWSFCGREERQTM
SPLSFDDYKISKEWTATPTFGSVCNQQPLDLSSGVKQRSDVKSKTRVPWESVLDLSVHKK
PYSDTEIKECRENNSVQPTCSGIKKKKPTTCMLQKVLLNEYNGTDVTTESTPDLTLNRSP
SPCKSSVPQPEPDVDPGLSAPSVESPSHNSPASPLPQTSALSSLCQLPPLLTPTNPSSPP
PCPPLLTLATQPPPLLPTVPLPLPDASASVTPTPSCPSPLCNTGTQSSLPILSPTVSPSP
SPIPSVELFTTASPGPPNLSSSSSSSSSPSSTSSSSSFSSSSSSSFSSSSSSSSSPSPPP
LSVVSSVVSPADHLESSLPIIAFKQEEMESEHLKPREDPETSSEADVVQEMFNKSFVCNV
CESPFLSIKDLTKHLSVHAEEWPFKCEFCVQLFREKTDLSEHRFLLHGVGNIFVCSVCKK
EFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKASVEHMQSLPEVSLEPSKE
EEDEDLNDSSEELYTTIKIMASGIKSKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGAT
ATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQT
VQPKNGMVIIAGTGKNAFRRMGQPKRLNFNVEISKLSSNKLKLSALKKKNQLVQKAILQK
KKSAQQKADLKNSVSESDSHICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKS
GSLSSSASGDKGNNQRRRTADAEIKMQSMQAHLGKTRARTSGPVQIQLPTASFKSKQNVK
FIPPIRSKKPSLSSVLRNSSPVRVAKMTHIEGKKTKVVAKNNSGISSKTSQKLHVRIQRN
KAVLPSKSAVANKKKTDRFSVKSRERVGGPVTRSLQQAANADTIENKREESSTKQELKDF
SYRLRMASRCSSSSSQNTCTRQCKKSNCTMAHFFKE
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgaatctgcaggagcagctgagactttggctgatgtacctgaa
catgtgcttaaaggacttcctgaggaagtgaggcttttcccatctgctgttgacaagaca
cggcttggtgtctgggcaacaaagtcaattttaaaaggcaaaaaattcggaccatttgtt
ggtgacaagaaaaaaagatcccaagttaagaacaatgtattcatgtgggaggtatattac
ccaaacttgggatggatgtgtgttgatgcaactgatccaaggaaaggaaactggctacga
tatgtgaactgggcactttcgggaaaggagcaaaatctattccctttggagatcaacagg
accatttactacaaaaccttaaagccaattgagccgggcgaggagctgttagtctggtac
aatggggaagacaacccagagatagcagctgctattgaggaagagcgagccgcccaccgc
agcaagaagcactcgccgaaagccaagaaagggaagaaaaaagagtgtaaaaacaagagg
aaaaaggcaatagatacaaagccaagaaagactgatttggattttgcttccacagatatg
agggagtctaaagaagaccgtaaagaggaagatgaaaagccatctgtttctgctgtgctg
tcactggaacaaacagctgtaattcaggagatggtaaatcaagatgttcttccaaaacta
atgatccccagtcctaccagtgagccacgaacaatgcctgaagacaaaccaggagcaata
acttgtggatcagatgatttggaggaagaggaggaggaagaagaagaggaggaagatgaa
gaggaggtggaagatgctaatttacctgaagaaagccctggaaaagagcctacagctata
tgtgaagaaaagctagaatctatggaggaacaaataagcatatcggaagaatctctagag
agctccccgaagaaaacaccggttgtaaaaattcctaaagcaaaaggtgtatctaatggt
gacctccaggaaacatttatgtttccctgtcagcattgtgagaggaagtttacaacaaag
caaggacttgaacgccatatgcatattcatatatctagtgtcaatcatgctttcaaatgc
cgatactgtgggaaagcctttggcactcaaattaatcggcgaaggcatgagcggcgtcat
gaagcagggccaaaaaggaaaccattaacactgacttcggccccacaatctgatgatgtt
gctgatggacagacatttgcagatgacggtcttaaagatgaattaaacatttccaatcct
gtgcaagactttgcagtcttggattctgagaaggtctcccaagaaatgtcaaattctacc
cttgttgagaacaaggaacccaaagaattgcatccttgcaaatattgtaaaaaggttttt
ggaacgcatacaaacatgcgtaggcatcagcgtagagttcatgagcgtcatcttattccc
aaaggtgtcaggagaaaaggattcattcttgaagaaccgcaacttcaaactgagcaggcc
caaccagcccagagtgtgtatatagcaagtacagaattagaagaggatggtgaagccgat
gacatatatattatggatatttctagcaatatctcagaaaatttaaattactatattgat
ggtaaaattcagtccaacagtagcactagcaattgtgatgtgattgagatggaatccaat
tctgcagacttgtatggaataaattgtttacttagtccagtcacagtggaaatttctcaa
aatttaaagtctacgcaaacacacatgactgatcttcctaaggagccttctagtggtgga
agcagtgaatccaaaaagaggagaacaaccagccctcctcttttacctaaaataaaaact
gaaatagatccagaacctataactccttcatgttcgttaaatcttcctcttagcatttca
acagctgagagcttaacttttcataaagaaaaaagtgtttatttgtcatccaagttaaaa
caacttcttcagacacaggatagtaataagataactcaagcagcaactgaaatccctaaa
ttaggtccttctgctacatcttcacccattttgccttcagtatctagtaggtttaaaagg
agaaccagctctcctcccagttctccacagcatagtccagcgcttcgagacttcggtaaa
caaggagatggaaaaaccacgtggagtgatacagttctaggttcaaagatgccaaaatta
ggaagtcacagcaactcacctgtatggagcttttgtgggagggaggaaagacagactatg
agtcctctgagttttgatgactataaaatatctaaggaatggacagcaactccaaccttt
ggtagtgtgtgcaaccagcagccattagatttatctagtggtgtaaaacaaaggtctgat
gtcaaaagcaagactcgggttccttgggaatcagtgttagatctaagtgtgcacaagaag
ccatatagtgacactgaaattaaggaatgcagagaaaataattcagtacagccaacatgt
agtggtattaaaaagaagaaaccaaccacatgcatgttgcaaaaagttctgctgaatgaa
tataatggaacggatgtaactacagaaagcacaccagatttgactttgaatagaagccca
agtccatgtaaatcatcagtaccccagccagaacctgatgtcgatcctggtctgtcagca
cctagtgttgagtccccttctcataattcccctgcttcccctttacctcagacatctgct
ttatcctccttgtgtcagctgccccctcttctaacgccaacaaatccttcctccccacca
ccttgtcctcctttgttaacacttgctacacaaccccctccacttcttcctactgttcct
ttaccacttccagatgcctctgccagtgtcactcccactccttcgtgcccatcaccactc
tgtaacactggtacacagtcctcacttccaatcctttcacctacagtttctccctctcca
tctcctattccttctgttgaactttttactactgcttcacctggtcctccaaacctctcc
tcctcctcctcctcctcctcctccccctcctcgacctcatcttcctcttctttctcctct
tcctcctcctcttccttttcctcctcctcctcttcttcatcatctccttctcctcctcct
ctttcagtagtctcttctgttgtttcccctgctgatcatctggaaagtagtctccccata
atagcttttaaacaagaggaaatggaaagtgagcacctgaagccaagagaagatccagag
acttcaagtgaagcagatgtagttcaggaaatgttcaataaaagctttgtgtgcaatgtc
tgtgaatcaccttttctttctattaaagacctaactaagcatttatctgttcatgctgaa
gaatggcccttcaaatgtgaattctgtgtacagctgtttagagaaaaaactgacttgtca
gaacatcgctttttgcttcatggagtaggaaatatctttgtatgctcagtttgtaaaaag
gaatttgcctttttgtgcaatttgcaacaacatcagcgagatctccatccagacaaagaa
tgcacacatcatgagtttgaaagtgggactctaagaccccagaattttacagatcccagt
aaggcaagtgtagaacatatgcaaagcctaccagaagtttccttggaaccctcaaaagaa
gaagaggatgaagatctaaatgactcctctgaagagctttatactaccataaaaataatg
gcgtctggaataaagtcaaaagatccagatgttcgtttgggcctcaatcaacactatccg
agctttaaaccacctccatttcagtatcatcaccgaaatcctatgggtattggagccact
gctacaaatttcactacccataatattccacagacctttactactgccattcgttgcaca
aaatgtgggaaaagcgttgataacatgcctgaattacacaaacacatcttggcatgtgcc
tctgccagtgacaaaaagagatacacgcccaaaaaaaatccagtaccactgaagcagacg
gtgcagcctaaaaatggcatggtcattatagctggcactgggaaaaatgccttcagacga
atggggcaacctaaaagacttaatttcaatgttgagattagcaaattgtcttctaataag
ctaaaactaagtgcattgaagaagaaaaatcagcttgtccaaaaagcaatcttgcaaaaa
aagaaatctgcacagcagaaggcagacttgaaaaatagtgtttctgagtcagactctcac
atctgcccctactgtaatagagaattcacttacattggaagtttgaacaaacatgcatct
tatagttgtcccaaaaaacccatctccccttcctctaaaaaaaattcatccaaaaaaagt
gggagcttatcatcatctgcaagtggcgataaaggcaacaaccagcgcaggcgaacagca
gatgcggagataaaaatgcagagtatgcaggctcacttgggcaagacgagagcacgaacc
tcaggacctgtacagattcagctgcctactgcatccttcaaatcaaagcaaaatgtaaaa
tttatacctccaattagatccaaaaagccaagtctctcttcagtgttaaggaactccagc
cctgtaagagtggccaaaatgactcacattgaggggaaaaaaactaaagtggtagccaag
aataattctggaatctcaagcaaaacatcccagaaactacatgtcagaatacaaaggaat
aaagccgttttgccaagtaagtctgctgtggcaaacaagaaaaagacagacaggttcagt
gtaaaatctagagagagggttggaggacctgtcactcggagcttacagcaggcagctaat
gcagacacaatagaaaacaagagagaagagagcagtacaaaacaagaactaaaagacttc
agttacagactccgcatggcctctagatgttcctcctcctcttctcagaacacctgcacc
aggcaatgcaagaaatccaactgcacaatggcccacttcttcaaggaatag
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integrated database retrieval system
