Chelonoidis abingdonii (Abingdon island giant tortoise): 116821923
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Entry
116821923 CDS
T07367
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116821923 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116821923 (EXOSC10)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
116821923 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF4230
Motif
Other DBs
NCBI-GeneID:
116821923
NCBI-ProteinID:
XP_032631331
Ensembl:
ENSCABG00000017400
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MAAAGGWGSRSAAVKTGRIMDTGSGGSTEEPPGGCSDTVLPGFRDADSFVKHALGTMVAA
TKASNGLPQPGDEYDFYRSFPGFRAYCETQGDRLLHCMSKVMQYHGCRSHIKDRSKATEL
EDKFDLLVDSNDVILERVGILLDEAAGVNKNQQPILPAGMQLPKTIVSSWNRKSGESHRT
KSETFRLLHAKNITRPQLRFREKIDNSNAPFVPKLFVKPNALKPLPEALAKSRRERKERP
EDLDVPAALADFLHQQRTQQTEQDMFAHPYQYELEHFVPPDEALEKPQLQMYRPVEDTPC
HFISTLDELVELNEKLVSCREFAVDLEHHSYRSFLGLTCLMQISTRMEDFIIDTLELRSD
MYILNEAFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGRHSLDHLLK
LFCHVETDKRYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKVREALWERGNGQPTQLQV
VWQRSKDICLKKYIKPIFSEDSYLELYRRQKKHLNTQQLTALKLLFAWRDKMARQEDEST
GYVLPNHMLMKIAEELPKEPQGIIACCNPIPPLVRQQINEMHLLIQQAREMPLLKSETGT
VVKKKGSVPNPERLENHLFGPHDNSRVPLDDIQNPSALEPAPVLECGSLFSDSEGEMDGT
RILPNSTCLVATATISIFNEPDVDEGNEKNLTVAQQKAQRIMESFENPFRMYLPSEQNPA
HISQSAKFDPSSKIYEISNRWKLMSQAQLQKEAKEEAKKKAVQQRAAREQMQKECKATAE
NIVSVRQQAAQEQASKKRERVTSEPGTDTPKQEKKRPKASQQPEEQEMPKQFTPFDYSKS
NFKVFAGNSKSKQSSQFDPAKQAHTGKKFSGANKLQHPAGSKSMSYLTGKSDRGSKHSWP
KR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccggcggatgggggagtcgtagcgcagcagttaagacgggtcggataatg
gacacggggagcggcggctccacggaggagccgccgggaggctgttcagacaccgtgctt
ccggggttcagggatgccgactccttcgtcaagcatgcacttggcactatggtggctgct
actaaggcatctaatgggctccctcagcctggagatgaatatgacttctatcgcagtttt
cctggattccgggcatactgtgaaacacaaggtgacaggctgcttcactgtatgagcaag
gtgatgcagtatcatggctgtcgcagtcacatcaaggatcgcagcaaagcaacagagctg
gaagataaatttgatttgctggttgactccaatgatgtaattcttgaaagagtgggtatt
ttactggatgaagcagcaggagtgaacaagaaccagcagcctatcctccctgcagggatg
caactcccaaagacaattgtttccagctggaaccgtaagagtggagaatcccacagaaca
aagtctgaaaccttccggttgttacatgccaagaatatcactcgaccacagctcagattt
cgagagaagattgacaattccaacgctccttttgtacctaagctttttgtcaaacccaac
gctctgaaaccgctgcctgaagcactcgcaaaaagcaggcgggagcgaaaggagcgtcct
gaagacctggatgtaccagctgctctggctgatttcctccatcaacagagaactcagcag
actgaacaagacatgtttgctcatccttaccagtatgaactggagcactttgttccacca
gatgaagctctcgagaaaccacaacttcagatgtacaggcctgttgaagacacaccctgc
catttcatctccaccttggatgagttggtagaactgaacgaaaagcttgtaagctgcaga
gaatttgctgtggatttggagcaccattcctataggagtttcctgggcttgacatgtctg
atgcagatttccacccggatggaagattttattattgacaccctggagctacgtagtgac
atgtatattttgaatgaggccttcacagaccctgctattgtgaaggtccttcatggtgcc
gactcagatgtggagtggctacagaaagattttggtctgtacttagtgaacatgtttgat
actcaccaggctgcgcgtctcctcaaccttggcaggcactccctggaccacttgctaaaa
ctcttttgccacgtggaaactgacaagcggtatcagctggctgactggaggattcgccct
ttgccagaggaaatgatccagtacgcccgagacgacactcactacctgctctacatttat
gataaagtgagagaggcactgtgggagagaggaaatggacagcccactcagctgcaggtg
gtgtggcagcgcagcaaggacatctgcctgaagaaatacatcaaacccatcttctcagag
gactcctaccttgagctctacaggaggcagaaaaagcatctcaacacacagcagctaaca
gctcttaaattgctctttgcctggagggacaagatggcacgccaagaggatgagagtaca
gggtatgtgctaccaaaccatatgctaatgaagatagcagaggaactgcccaaagaaccc
cagggcatcattgcttgctgcaacccgatcccaccactagtccgccaacagatcaacgaa
atgcatctcctcatccaacaggcccgagagatgcctctgctcaagtctgaaactggaacg
gtggtaaagaagaaagggtctgtgcccaacccagagaggctggagaatcatttgtttgga
cctcatgacaattcacgtgttcctctggatgatattcagaacccctcagccttagaacct
gcaccagttctggaatgtgggagcctcttttcagacagcgagggggagatggacggcaca
aggatattacccaattccacatgtcttgttgctacagccaccatcagtatattcaatgag
cctgatgtggatgaagggaatgagaagaacttaacagtcgcacagcagaaggctcagcgc
ataatggagtcctttgaaaatccgtttagaatgtatctgccttcagaacagaatcctgcc
cacatctcacaatcagcaaagtttgacccatcatcaaaaatttatgaaatcagcaatcgg
tggaagttgatgagtcaggcacaactgcagaaggaggcaaaggaagaagccaaaaagaaa
gcagtacagcagagagccgcccgtgaacagatgcagaaggagtgcaaagcaacagcagag
aatattgtctcagtccgtcagcaagctgcgcaggaacaggccagcaagaagagggagaga
gtcaccagtgaaccaggaacagataccccaaaacaagagaagaaacggccaaaagcctcc
cagcagccagaggagcaggaaatgccaaagcagttcaccccctttgattacagcaagtct
aacttcaaggtgttcgctggaaacagcaaatccaagcagtcatcccagtttgatccagcc
aagcaggcccacacaggcaagaaattctctggagccaacaaacttcaacacccagctgga
agtaaaagcatgtcctacctgacagggaaaagtgatcggggctccaagcacagctggcca
aaaagatag
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