Chelonoidis abingdonii (Abingdon island giant tortoise): 116822130
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Entry
116822130 CDS
T07367
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
116822130 (WDR1)
Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
116822130 (WDR1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
CFAP251_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
DSE1_N
eIF2A
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
ASA1
Beta-prop_SPT8
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Tricorn_2nd
PAC11
NBCH_WD40
Beta-prop_RIG_1st
WD40_RFWD3
WDR54
Ge1_WD40
RMC1_N
PROPPIN
Beta-prop_ELP1_1st
WD_LRWD1
Beta-prop_WDR11_1st
WD40_like
Beta-prop_DCAF12
BBS2_Mid
DUF5711
Motif
Other DBs
NCBI-GeneID:
116822130
NCBI-ProteinID:
XP_032631659
UniProt:
A0A8C0J8B2
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All DBs
Position
5:118567132..118592781
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AA seq
607 aa
AA seq
DB search
MPFENKKVFASLPQVERGVSKIIGGDPKGNNFLYTNGKCVVIRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRLAAV
GEGREKFGAVFLWDTGSSVGEISGHNKVINSVDIKQTRPYRIVTGSDDNCGAFFEGPPFK
FKFTISDHSRFVNCVRFSPDGNRFATSSADGQIFVYDGKTGEKVCALGGNKAHDGGIYAI
SWSPDSTHLLSASGDKTAKIWDVGANSVVSTFNMGSNVLDQQLGCLWQKDHLLSLSLSGY
INYLDKNNPNKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDDFS
GKGHTNQVSRMAVDELDHLVSCSMDDTVRYTSLTKRDYSGQDVVKMDVQPKCLAVGPGGY
TVVICIGQIILMKNKKKCFAIEDPGYEPEVVAVHPGGGTTAVGGLDGNVYLYSIQGTSLK
IDEKTLQAKGPVTDLSYSHDGAFLAVCDANKVVTVFSVADGYAEHNIFYGHHAKIVCLAW
SPDNEHFASGGMDMMVYVWTLSDPETRVKIPDAHRLHHVSSLAWLDEHTLVTTSHDASVK
EWSISYK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgagaacaaaaaagtgtttgccagcctcccccaggttgaaagaggtgtctcc
aaaattattggaggggatcccaagggcaacaactttctgtataccaatggaaaatgtgtc
gtcatcagaaacattgataatccagcaattgctgatatctatactgagcatgcccatcaa
gttgtggttgccaagtatgctcccagtggattctacatagcatctggagatgtttctgga
aagcttagaatttgggataccacacagaaggaacacctactgaagtatgaatatcagcca
tttgcaggaaaaatcaaggatattgcctggactgaagacagcaagaggcttgccgctgtg
ggggaaggcagggagaaatttggagcagtgttcctatgggatactggctcttcagtcgga
gagatctctgggcacaacaaggtgatcaacagtgtggatataaaacaaacaagaccctat
cgtatagtaactggcagtgatgacaattgtggtgctttctttgagggaccgccattcaaa
ttcaagtttacaataagcgaccacagccgttttgttaactgtgtgaggttctctcctgat
gggaacagattcgctacatctagtgcagatggccagatttttgtctatgatgggaagact
ggagagaaggtttgtgctctgggtggaaataaggctcatgatggaggcatttatgctatt
agctggagccctgatagtactcacttgctttctgcttctggagacaaaactgctaaaatc
tgggatgttggtgctaactctgttgtcagtacgtttaacatgggatcaaatgttctggat
cagcagttgggttgcttgtggcagaaggaccatttactgagcctctccctctctggttac
attaactatttggataagaataacccaaataagcctctacgtgtcataaagggtcatagc
aaatcaattcagtgtctgacagtgcataaaaatggtggaaaatcctatatttactctgga
agtcatgatggacacattaattattgggattctgaaactggggagaatgatgacttttct
ggaaaagggcatacaaaccaggtttctagaatggccgtggatgaattggatcatctggtc
agttgcagtatggatgacactgtgcgttatactagcctaaccaaaagagactacagtggc
caggatgttgtaaaaatggatgttcaaccaaaatgtttagctgttggtcctggtggatat
acggtagttatatgcattggacaaatcatcttgatgaagaataagaagaagtgttttgca
attgaggaccctggctatgaaccagaagtggtggccgttcacccaggaggtggtacaact
gcagtgggaggattggatgggaatgtctatctatattcaatccaaggaacctctctgaaa
atcgatgagaagaccttgcaagctaaaggtcctgtgactgacctgtcatattctcatgat
ggtgcctttcttgcagtttgtgatgcaaacaaagttgtcactgtctttagtgttgctgat
ggctatgcggaacataacatcttctatggacatcatgcaaaaattgtttgccttgcctgg
tctccagacaatgagcattttgcttctgggggcatggacatgatggtttatgtttggacc
ttaagtgacccggagaccagagtcaagataccagatgctcataggctacatcatgtaagc
agcttggcatggctggatgaacataccctggtaacaacatcccatgatgcttctgtcaaa
gaatggtctatctcctacaagtga
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