Chelonoidis abingdonii (Abingdon island giant tortoise): 116822224
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Entry
116822224 CDS
T07367
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116822224 (PPFIBP1)
Membrane trafficking [BR:
cabi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116822224 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
116822224
NCBI-ProteinID:
XP_032631813
Ensembl:
ENSCABG00000000990
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMEADEKEGLRCQVPDSTAEALIEWLQSQMTNGHISGNGDIYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLENQKLNLMAEISNLK
LKLTAVEKDQLDYEDRYGDTESLHNVIADLRQQMEKVEVELALFQEKRLQYGDQEGLMQE
ISELRLRVGEMDSERLQYEKKLKSTKSLMAKLSSMKIKVGQMQYEKQRMEQKCQILKDEL
ASWKEKLEQKEAEVRKLQEKLVCKMKGGGVEITDRDENCKKKLKDKNIEVQKMKKAVESL
MAANEEKDRKIEELRQSLNRYKKVQDMVILAQGKKGKEGECEEFLNSGSVSAVLLDMQSL
TDQEKSPSPVPVISSPSHEEFNTTVHEENALQIHTSILQVSIPAFPPAPESSEAATEKVK
AQPKPEVASEVSEGTTPCSSVETQPCDSPLMSALQKSSSLGNLKKEASEVDKESVQKPAE
TKAPMEGNKSGTLPPKSPSHSGTGDEDSFGTRKARSSFGRGFFKIKSNKRTASAPNLDRS
RSASAPTLAETEKGSADHLDLAGLPPRPKETDSGQMSPSSPDSKKKARGIKKLFGRLKRS
QSTTFNPDDMSEAEFKRGGTRATAGPRLGWSRDLGQSNSDLDMPFAKWTKEQVCNWLQGQ
GLGSYMNHGKHWILSGQTLLQASQQDLEKELGIKHPLHRKKLQLALQALGSEEENNHGKL
DYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMSVDDLLSLKVVSVLHHLSIKRAIQVL
RINNFEPNCLRRRPSDENNITPSEVTQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMV
LEPRFNVETMAQLLNIPPNKTLLRRHLATHFNLLVGQDAQHQKREAMESPDYVLLTATAK
VKPKKLAFSNFGSLRKKKQDDVEEYVCPMELGQASGSGSKKGFKAGLDIQVYDDNDLDRL
EQMEDSEGTVRQIGAFSEGINNLTHMLKEDEMFKDFATCSPSTSITDEDSNV
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacgcaagtgacatgctggctgcagctttggaacagatggacggcattata
gcaggttccaaggctttggagtattccaatggtatatttgattgtcagtcccctacctcc
ccattcatggggagcctgcgagcactgcaccttgtggaggatttgcgtggtttactagag
atgatggaagcggatgaaaaagaaggattgcgatgtcaagtcccagattcaacagcagaa
gctttgattgaatggctccaaagccaaatgactaatggacatatatctggtaatggagat
atatatcaagaaaggctagcacgtctggaaaatgacaaggaatctcttgttctgcaagta
agcgtacttactgaccaggtggaagcacaaggagaaaagattcgagatttagagttctgc
ctagaggagcacagggagaagctgaatgccacagaagagatgctgcagcaggaactcctg
agtagaacatcccttgaaaatcagaaattgaaccttatggcagaaatttccaatttgaag
ctaaagctaacggctgtagagaaggaccaattagactacgaagacagatacggagacaca
gagtcactccataacgtaatagcagacctcagacaacagatggagaaagtggaggtggaa
ctagcactgttccaggaaaagaggttacagtatggtgatcaagagggtttgatgcaggaa
atcagtgaattacggttaagagtgggagagatggatagtgaaagacttcagtatgagaag
aagcttaaatccaccaaatctttaatggccaaactttctagcatgaaaatcaaagtgggt
cagatgcagtatgaaaagcagcggatggagcaaaaatgccagatattaaaggatgaactg
gcatcttggaaagagaaattggaacagaaggaagcagaagtcagaaagttacaggaaaaa
ttggtgtgcaagatgaaaggaggaggagttgaaataactgacagagatgaaaattgtaaa
aagaagctcaaagacaaaaatatagaggtacagaaaatgaagaaggctgtggagtctcta
atggcagcgaatgaagaaaaggatcggaagatagaagagctgcgacaatccctgaatcgg
tataagaaagtgcaagacatggtaatattggctcaggggaaaaaaggcaaagaaggcgaa
tgtgaagagtttttaaattcaggctctgtttcagctgttttattggacatgcagagttta
actgatcaagagaaaagcccatctcctgtcccagtaatcagctctccgagccatgaagag
tttaacaccactgttcatgaagagaacgcactacaaattcacaccagcatcttgcaagtt
tcaatccccgcttttccaccagcacccgaaagctcagaagccgctacagaaaaagtaaaa
gcgcagcctaaaccagaagttgcaagtgaagtgagtgaagggacaacaccatgttcctcc
gtagaaacgcagccatgtgacagtccattaatgtcagccctgcaaaaatccagcagtctg
ggcaatttgaagaaagaggcatcagaagtggacaaagaatctgtacagaaaccagcagag
actaaagctcccatggaaggtaacaagtctggaacccttcctccaaaatccccaagccat
agtggtaccggagatgaggacagttttggtacccgaaaagccagatcttcatttggacga
ggctttttcaagataaaaagtaacaagaggacagcaagtgcacctaatttggatcgcagt
cgaagtgcaagtgcacctaccttagctgaaacagaaaagggatctgcagatcacttggac
ctagctggattgccccctcgaccgaaggaaactgatagtgggcagatgtctccctcttct
ccagattccaagaagaaagccagaggaatcaagaaattatttggaaggcttaaaaggagc
caatccaccacatttaacccagatgatatgtctgaggcagagttcaaaagaggagggaca
agagcaactgcaggaccaagactgggctggtctcgagatcttgggcagtctaacagtgac
ctggatatgccatttgctaaatggacaaaggagcaagtttgcaactggctccagggccag
ggtttaggttcgtacatgaatcatggcaaacactggatactgtctgggcagactctcttg
caagcttctcagcaggatctggaaaaggaacttggaataaagcatccactgcatcggaag
aaacttcagctcgctcttcaggcactggggtcagaagaagaaaacaatcatggaaaactg
gattacaactgggttaccaggtggttggatgatattggacttccccagtataagactcaa
tttgatgaaggaagggtggatggtcgaatgctccattacatgagcgttgatgatttgctg
tccttgaaagttgttagtgtccttcaccatcttagcattaaaagagccatccaggtcctg
agaataaataactttgaacccaactgtctgcgtaggaggccatctgatgagaacaacatc
accccatcagaggttactcagtggaccaatcaccgtgtaatggagtggttacgctcagtt
gacctagcagaatatgcacctaatttgagagggagtggtgtgcatggtggacttatggtc
ttggaacctcgttttaatgtggaaaccatggcacagttgctgaacatcccaccaaacaag
acgctactgagacgccatttggcaacccatttcaatttactggttggtcaggatgcccaa
catcaaaagcgtgaagccatggaatctccagactatgtccttttaactgctactgccaaa
gtgaagccaaaaaagcttgccttcagcaattttggaagtctgaggaagaagaagcaggat
gatgtggaagagtatgtgtgcccaatggaactgggacaggcatctggaagtgggtctaag
aaaggatttaaggctggcttggatatccaagtgtatgacgataacgatttggatagactg
gagcagatggaagattcagaagggacagtgaggcaaataggagcattctctgaaggcatc
aacaacttgacacacatgttaaaagaagatgaaatgtttaaagactttgctacttgctct
cctagcaccagtataacagatgaagattcaaatgtgtga
DBGET
integrated database retrieval system
