Chelonoidis abingdonii (Abingdon island giant tortoise): 116822375
Help
Entry
116822375 CDS
T07367
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116822375
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
116822375
3'-5' decay
Other 3'-5' decay factors
116822375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
PAM2
AAA_30
Motif
Other DBs
NCBI-GeneID:
116822375
NCBI-ProteinID:
XP_032632124
Ensembl:
ENSCABG00000020461
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
PLFFSRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILRQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSDLFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEIVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRQQHSANTNKQQQSPPKGKGHHHNQNDH
FQTDGIVQPNPSVLIGNPIRAYTPPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAV
YGGNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSP
VSIGQQQLHHQEKEQHEQNRNGKTENSAGPEINKNRTPEKKPVESKQVDVEGNSQNRSPE
SRSGVGYPNSKFHRKDNLNPRQLNLHLTPPHTQYAVPSRHYQHLSQIPRQPYPVQQQQNL
LSQQQNHLPEQQNQIPPQQSQVVQQHNHVNQQPPQPSQLSPAYQMGPNQSFFNNPIPHRP
HSPAVDAVMSEHHPPPMLQEVSNTLRPITQHNPMLPSHLNNFIEENPAGMPIGETLDRMH
GNVALETLRQQQQARLQQWNEHNAYLSQGNIPYPHHHHPHLQHLPQQSIGLHQQPVRANW
KLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPALP
SCNSNHSGHFPNFTENNRDIEMSNNPAFQQHLPQIYNPPFSLPSEHITPPPLKYLQPDGS
WTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQSHQHAVGQEPFHPLTSRAVSASSL
HSLEEYEPRGPGRPLYQRRISSSSVQACSEDFNTPQDSLGQCKELQDHSNQSSFNYSSPE
LWVNSTSSAPYQNIPCNGSNRAVPPRELLAPPKIVKPPEDHLKVENIQLSNSFNYNVLQH
LGQFPPLMPNKQIVESNSNSQQNAGGNKPAMSYASALRAPPKPKPPPEQAKKNSDPLSLF
QELSLGSSSGSNGFYSYFK
NT seq
3662 nt
NT seq
+upstream
nt +downstream
nt
cccctctcttcttttctagggtatatttcagaaatcgctgggtaaagactgtccacccag
tagtgcatcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaag
aagatattcttagacaacgagtagttgttgttactttgaatacttcacagtatctatgtc
aactggatcttgaacctgggttttttacacacattctgttagatgaagctgcgcaggcca
tggagtgtgagacgatcatgcctctagcattagcgaataaaaacacaagaatcgtcttgg
ctggagaccatatgcaactcagtccttttgtctacagcgaatttgccagggagagaaatc
ttcatgtttcattacttgatcggctctatgagcactaccctgcagagtttccatgcagga
tcttgctgtgtgagaactatcgctcccatgaagctatcatcaattacacatctgaccttt
tctatgagggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctt
tgactttcttcacagcacgtggagaagatgtgcaggagaaaaacagtacagctttctaca
acaatgcagaggtatttgaaatagtagaacgtgttgaagaactgagaagaaaatggccgg
tagcttggggaaaattggatgatggcagtataggggttgtaacaccatatgctgatcaag
tgttccgaattcgggcagaacttcgaaaaaagagattatctgacgtcagtgtagaaagag
tgctaaatgttcagggaaagcagtttagagtgttgtttctcagcacagtgcgaacacggc
atacgtgcaaacacaagcaaacaccgatcaaaaggaaggagcagttattggaggattcaa
cagaggacttggattatggttttctgtccaattacaaacttctcaacactgccattacaa
gagcacagtccctggtagctgtggtgggagacccaattgctttatgttccattggaagat
gcaggaaattttgggagaggtttattgccttgtgtcacgagaatgagagcctccacggta
tcacgtttgaacagatcaaggctcagctggaggctttggagttaaagaaaacctatgtgt
tgaatccactagcacctgagtttatccctcgggctctgcgacagcagcattcagcaaata
ccaacaaacagcaacaatcaccacccaagggcaagggtcatcatcataatcagaatgacc
attttcaaactgatggaattgttcagcccaatccttctgtcctaattggaaatcctatca
gagcgtatactcctcctcctcctcctcctcttggacctcatcccaacctggggaaatctc
caagccctgttcaaaggatagatcctcacactgggacaagtattctttacgtacctgctg
tctatggaggaaatatggtcatgtctgtgcctttgcctgtgccgtggacagggtatcagg
gtaggtttgcagttgaccctcgaattattacgcaccaagcagctatggcatataatatga
acctgttacaggcgcatgggcgcgggtctcctataccttatggcctgggacatcattcac
cagttagtatagggcagcagcaacttcaccatcaagaaaaggagcagcatgaacaaaatc
gaaatggtaaaactgaaaacagtgctggacctgaaattaataaaaatcggacacctgaga
aaaaacctgtggaatccaaacaggttgatgtagaaggaaattcccaaaatagaagcccag
agtcacgttccggcgttggttatcctaattctaaatttcatcgcaaagataatctcaacc
ctaggcaactgaatctacatctcacccctccccatacacagtatgcagtccccagtcgcc
actaccagcacctgtcccagatccccaggcagccataccctgtgcaacagcagcaaaatc
ttttaagtcagcaacaaaatcatttgcctgaacagcaaaaccaaataccaccccagcaga
gccaggtagtccagcagcataatcatgtaaatcagcagcctccacaaccttcacaacttt
cccctgcttaccagatgggccccaaccagtctttttttaataacccaattccccaccgac
cacattctcctgcagtagatgctgtgatgtcagaacatcatcccccacccatgttgcaag
aagtcagtaacactctgagacctattacacagcacaacccaatgctgccatctcacttga
acaacttcattgaagagaatcctgcaggaatgcccataggggagacattagatcgtatgc
atggaaatgtagctttggaaacattaaggcagcagcagcaagcaaggttacagcaatgga
atgagcataatgcgtatctcagtcaaggcaatattccatatccacaccatcaccatcctc
acctacaacatctaccccagcaatcaattggactgcaccaacagccagttagggcaaact
ggaaacttgcgagtaatacagaagatgaaacagaggcaacatattcaaggttccaggact
tgctcagagaactgtcacaccgcgatcaaagtgaaagcagggacctcgctgaaatgccac
ctccccagtccagactgttgcaatacagacaagttcagcccagaagcccaccagcactcc
cttcatgcaactcaaaccatagcggccactttcctaacttcactgaaaacaacagagaca
ttgaaatgtccaacaacccagcatttcagcagcatttgccccaaatatacaatccccctt
tctcactgccatctgaacacataaccccacctcctttgaagtacctgcaacctgatggat
catggacctatgctaacctacagcagaatcacctaatggggcagggctttcattatggta
tacctccattgccccatagatcacaacagaacccttttatacaaatacagagtcatcagc
atgcagtgggtcaggagccatttcatccgctcacatctcgagcagtatctgcttcttcgc
tccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaagaagaa
tttcctctagttcagtccaggcttgttctgaagattttaacactcctcaagacagtcttg
gtcagtgtaaagagcttcaggaccatagtaaccagtcttctttcaactattcatcgcctg
agttgtgggtaaactccacctcatctgccccatatcagaacattccatgcaacggatcca
acagagcagtaccacccagagaactgttagctccaccgaagatagtcaaacccccagagg
atcacctgaaagtcgaaaacatacagctgtccaattccttcaactataacgtgcttcagc
atctcggccagttcccaccccttatgcccaacaagcagatcgtcgaatcaaacagcaaca
gccagcagaatgctggtgggaacaagcctgccatgtcctacgcaagtgctctgcgggctc
caccaaagcccaaacctcctcctgagcaggcaaaaaagaatagtgaccctttgtctttgt
ttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctattttaaat
aa
DBGET
integrated database retrieval system
