Chelonoidis abingdonii (Abingdon island giant tortoise): 116822388
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Entry
116822388 CDS
T07367
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116822388 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
116822388 (LRFN1)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
SALM family
116822388 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
cabi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116822388 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_1
LRR_5
ig
Ig_2
fn3
LRR_9
Sp38
Ig_DSCAM-DSCAML_C
C2-set_3
Motif
Other DBs
NCBI-GeneID:
116822388
NCBI-ProteinID:
XP_032632148
Ensembl:
ENSCABG00000008175
UniProt:
A0A8C0GL74
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MEKLLLPLLMLGTMAKGQHCPGRCICQNISPTLTMLCAKTGLLFVPPSIDRRTVELRLTD
NFITVIRRKDFSNMTNLVHLTLSRNTISQVMPYAFADLRALRALHMNSNRLASLRNEHFK
GLGNLRHLILGNNQISNIQPASFDEFLATVEDLDLSYNNLETLPWEAIGQMVSLNTLTLD
HNLIDHIAEGTFSQLHKLVRLDMTSNRLQKLPPDNLFLRAQVLANVRGSHPSTLTISFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSISEEEFICEPPLITRQYSTKAFI
MEGQGVSLKCKAVGDPDPSIHWIAPDGKLIHNTTRATVYDNGTLEVHITTLKDNGVFTCI
ASNAAGEATAPVEVCIVPLPLLVNNTGHTKEPDPGSSDITTSTKSGANDTKNHLEKKIVA
GELTSTSVVIHWPSERHIPGIRMYQIQYNSSLDDSLVYRMIPPSSRAFLVNDLAAGRAYD
LCVLAVYDDGVTALTATRVVGCVQFTTEGEMAQCHALHTQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKVHSGHEGPKKAKVSNVYSQTNGGQPPATKPAEDKYETFQEAGPTEAGPTE
AEPKKDTPTAPEPDKRDPKPGADLQTVTLLSSEEGPPEGSVTGSLRLLRESGPGSQHRVT
LGSVGLFPRELSRTHHHRHSFDGDYALFQSHSYPRRARTKRHMSTSQLNAEDCPLSQRRV
TFSSTEWMLESTV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactcctcctgccccttttgatgcttggcaccatggcgaagggtcagcactgc
cccggccgctgcatctgccagaacatctcgcccaccctgaccatgctgtgcgccaagacg
gggctgcttttcgtgccgccgtccattgaccggcgcacggtggagctgcggctgacggac
aacttcatcaccgtcattcggcgcaaggacttctccaacatgaccaacctggtgcacctg
accctctcccggaacaccatcagccaggtaatgccctacgccttcgccgacctgcgtgcc
ttgcgcgccttgcatatgaacagcaaccggctggcctccctccgcaatgaacatttcaaa
ggcctgggtaacctccggcacctcatcctgggcaacaaccagatcagcaacatccagccg
gcctccttcgacgagttcctggccaccgtggaggacctggatttgtcctacaacaatctg
gagacgctgccatgggaggccatcgggcagatggtcagtctgaacaccctgaccctagat
cacaacctcatcgaccacatcgccgagggcaccttctcccagctccacaagctggtgcgt
ttggacatgacctccaaccggttgcagaagctgcccccagacaacctcttcctccgggct
caggtgctggctaatgtccggggctcccacccatccaccttgaccatcagctttggaggc
aaccccttgcattgcaactgcgagctgctctggctccggcgcttgacgcgggaggacgac
ctggagacctgcgcctctcctgagcacctgatggataagtacttctggtccatctccgag
gaggagttcatctgcgagccgcccctcatcacgcgccagtactccaccaaggccttcatc
atggagggccagggagtcagcctcaagtgcaaggcggtgggagaccccgacccgtccatc
cactggatcgcacccgacggcaagcttatccacaacaccacgcgcgccacggtctacgac
aatggcacgctggaggtgcacatcaccacgctcaaggacaacggggtcttcacctgcatc
gcctccaacgccgccggcgaggccacggcccccgtggaggtctgcatcgtgccactgccg
ctgctggttaacaacacgggccacacgaaggagcccgaccctggctcgtctgacatcacc
acctccaccaagtcgggcgccaacgacaccaagaaccacctggagaagaagattgtggcg
ggtgagctgacctccacctcggtggtgatccactggccgtcggagcggcacattcctggc
atccgcatgtaccagattcagtataacagctccctggacgactcactggtgtacaggatg
atccccccatccagcagggccttcctggtgaatgacctggcggcggggcgggcctacgac
ctgtgcgtgctggccgtctacgacgacggggtgacggcgctgacggccacccgggtggtg
ggctgcgtccagttcaccacggagggggagatggcccagtgccacgccctgcacacccag
ttcctgggcggcaccatgatcatcatcatcggcgggatcatcgtcgcctccgtcctggtc
ttcatcatcattctcatgatccgctacaaggtccacagcgggcacgaggggcccaagaaa
gccaaggtcagcaacgtctactcccagaccaacggcgggcagcccccggccaccaagccc
gctgaggacaaatatgagaccttccaggaggcggggcctacggaggcggggcctacggag
gcggagcccaagaaggacacacccaccgcccccgaaccggacaagagagaccccaagccg
ggtgccgacctccagactgtgaccctgctgtcctcagaggagggcccgcccgagggcagc
gtgaccggctccttgcgtctcctccgggagagcggaccgggcagccagcaccgggtcacg
ctgggcagcgtgggcctctttccccgggagctttcgaggactcaccaccaccgtcactcc
ttcgatggggactatgctctgttccagagccacagctacccgcgccgggcacggacaaaa
aggcacatgtccacatcccagctgaacgcggaggactgcccgctgagccaacgccgggtt
accttcagcagcaccgagtggatgctggagagcaccgtctga
DBGET
integrated database retrieval system
