Chelonoidis abingdonii (Abingdon island giant tortoise): 116822390
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Entry
116822390 CDS
T07367
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116822390 (SAMD4B)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116822390 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
116822390
NCBI-ProteinID:
XP_032632155
Ensembl:
ENSCABG00000008142
UniProt:
A0A8C0GMV4
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MMFRDQVGILSGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCTEIHIVES
EANSAAVISQWHQESKDKVVSLLLSHLPLLQPGNTEAKSEYMKLLQKVLAYSIESNLFIE
ESRQLLSYALIHPATTLDDRNSLALWLNHLEERLSSGYSGQGRGRPDTAYHSRQGSDEWQ
GPVDSGMGELGHGWQEKLPRENGHLPFHSSSSVPSAINSMGNNANAALPCQIHPSPLKRS
MSLIPTSPQVPGEWMSPDELCARQAFIPGDHAPLSPQSSVASSGSEQTEEQIGSRNTFQE
DGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQNVTKGARHKIALSIQKL
RERQSVLKSLEKDILEGGNLWNALQELQQIIITPIKAYSSLQAMATPKEGQQAMPERHGA
PRPGLDKATNGAEDKEPAVDGFPSQTASPCDGESATAPIAEGDIPGQFTRVMGKVCTQLL
VSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRAFPRKAVLDMQGYRQ
QKGWAFGSNSLPIAGSVGVGVARRGQRPFQMPPRAMPPSRLGLLSPAGIGGVLPRHALTS
PIGSQGRQNLWFANPGGSNSMPGQSRSSVQRTHSLPVHTSPQAIIMFPQDCQIPGTDLEI
NPTLESLCLSMTEHALGDGTDKTSSI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggatcaggtgggaatcctgtccggctggttcaaaggttggaacgaatgc
gagcagacggtggctctgctctccctcctcaagcgcgtcactcgcacccaagcccgcttc
ctgcagctgtgcctggagcactcgctggccgactgcaccgagatccacatcgtagagtcg
gaggccaacagcgcagctgtcatcagccagtggcaccaggaatcgaaggacaaggtggtc
tccctgctcctgtctcacctgcccctgctgcagcctggcaacacggaagccaagtccgaa
tacatgaagctattgcagaaggtcctggcctactccatcgagagcaacctgttcatcgag
gaaagccggcagctgctgtcctacgccctcatccacccggccaccacgctggacgatcgc
aactccctggccctgtggctcaaccaccttgaggaacgcctgtctagtggctactccggc
cagggcaggggccggcccgacactgcctaccactcgcgccagggctcggacgagtggcag
ggccctgtggactcgggcatgggcgagctgggacacggctggcaggagaagcttccccgc
gaaaacggacacttgcctttccactcctctagctcggtgccctcggcgatcaacagcatg
ggaaacaacgccaatgcagctctgccctgccaaatccaccccagcccgctcaagcgctcc
atgtccctcatccccaccagtccgcaggtccccggcgagtggatgagccccgatgagctg
tgtgcccggcaggctttcatcccgggggaccacgcgcccctgtccccccagagcagcgtg
gcctcctcgggcagcgaacagacggaggagcagattggcagccgcaacaccttccaggag
gatggcagtggcatgaaagacgttccctcgtggctgaagagccttcgtctgcacaagtac
gcagccctcttctcccagatgacgtacgaagagatgatgaccctcacggagcagcatctg
gagtctcagaatgtgaccaaaggggccaggcacaaaattgccctgagcatccagaagctt
cgggagaggcagagcgttctcaagtctctggagaaggacatcctagaaggagggaacctg
tggaatgcgctccaggagctccagcagataatcatcacgcccatcaaagcatacagctcc
ctccaggccatggccacgcccaaggaggggcagcaggcgatgccggagcgccacggagcc
cccaggccgggcctggacaaagccaccaacggggcagaagacaaggagcctgcagtggac
ggcttcccatcccagacggcctccccctgcgacggggagtcggccacggcacccatcgcg
gaaggggacatcccggggcagttcacccgggtgatggggaaagtgtgcacgcagctgctc
gtctcccggcccgacgaggagaacatcaccagttacctccagctcatagagaagtgcctg
actcacgaggcattcacggagacgcagaagaagaggctgttgtcctggaagcagcaggtg
ctgaagctgctgcgagcgttcccccggaaagccgtgctggacatgcaagggtaccgccag
cagaaagggtgggcttttggttccaactctctccccatagctggatctgtgggggtgggc
gttgcgcgcagagggcagcggccgttccagatgccccctcgagccatgcccccgagccgc
ctggggctgctgagcccagcggggattggaggggtcttgccccggcatgcacttaccagc
cccatcgggagccagggacgacagaacctgtggttcgccaatcccgggggcagcaacagc
atgcccggccagagtcgcagctcggtccagcgcacccattcgctacccgtccacacgtcc
ccgcaggccatcatcatgttcccccaggattgccagatccctggaacagacctggagatc
aaccccacgctggagtcgctgtgcctgagcatgacggagcacgcgctgggcgatggcacc
gacaagacctccagcatctga
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