Chelonoidis abingdonii (Abingdon island giant tortoise): 116822585
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Entry
116822585 CDS
T07367
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03018
RNA degradation
cabi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116822585 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
116822585 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116822585 (LSM7)
03041 Spliceosome [BR:
cabi03041
]
116822585 (LSM7)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116822585 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
116822585 (LSM7)
Spliceosome [BR:
cabi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116822585 (LSM7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
116822585
NCBI-ProteinID:
XP_032632461
LinkDB
All DBs
Position
11:27791131..27802070
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQEG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaaagaagaagaaagagagcattttggatctctcgaaatacattgac
aaaacaattcgagtaaaattccaaggtggtagggaagctagcggagtcttgaaaggattt
gaccctcttctaaaccttgtgcttgatggcactattgaatatatgagagatccagatgat
caatacaaactaacagaggatacccgtcagctgggactggtggtttgcagaggaacatct
gtggttcttatttgtccgcaggatggaatggaagctattccaaaccctttcattcagcag
caggaaggctaa
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integrated database retrieval system
