Chelonoidis abingdonii (Abingdon island giant tortoise): 116822824
Help
Entry
116822824 CDS
T07367
Symbol
KDM1B
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116822824 (KDM1B)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116822824 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
Pyr_redox_2
DAO
Pyr_redox_3
FAD_binding_3
HI0933_like
SWIRM
Pyr_redox
NAD_binding_9
FAD_binding_2
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_7
AlaDh_PNT_C
KARI_N
Attractin
zf-RING_2
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
116822824
NCBI-ProteinID:
XP_032632853
Ensembl:
ENSCABG00000002093
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MSTGRIRTKKKSSSLDQSPDNLPLRSSGRQVKKKAAEAAEDDDDASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTSQIAKTYRCGMKLNNSTKIE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLSAYYPDXVGMSPSCTSTNRL
LGESNAVKLEHIKSAPNVAGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDP
TMYLALRNLILSLWYTSCKEVLTPHKCTHRIIVRGLVRIRCVQEMERILYFMARKGLINT
GILSVSSDQHLLPKEYHNKSVIIVGAGPAGLAAARQLHNFGIKVIVLEAKDRIGGRVWDD
RTFKGVTVGKGAQIVNGCVNNPIALMCEQLGIKMHKLGERCDLIQEGGRITDPTIDKRMD
FHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIQESGIQFSDLEEKVLQFHLSNLE
YACGSDLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIDKLAEGVDVRLKLPVHSIDYS
GEEVQVTTADGTVWTAQKVLVTVPLALLQKNAIQFNPPLPERKMKAINSLGAGVIEKVAL
QFPYRFWDSKIQGADFFGHVPPSSSKRGLFSVFYDMDPQGKYSVLMSVVTGDAVTTIKNL
DDKQVLQLCMTVLRELFKEQEVPDPVKYFVTRWNKDPWIQMAYSFVKTGGSGEAYDVIAE
DLQGTIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggaaggatacgaacaaaaaaaaagtcatcctctttggaccagtctccagat
aaccttcctttgaggagttctgggagacaggtgaagaagaaggcggctgaagcagcagag
gatgatgatgacgcatcagagaagaaatatagaaaatgtgaaaaagcagggtgcactgca
acatgtcctgtttgctttgcaagtgctgctgaaaggtgtgctaaaaatggctacacatct
agatggtatcatctctcttgtggggaacatttctgcaatgagtgttttgatcactattat
cgtagccataaagatggttatgagaaatacactgcttggaaaaggatttggaccagtaat
ggtaaaagtgagcccagtcctaaagctttcatggctgatcaacaacttccttactgggtg
cagtgcacaaaaccagagtgtgggaaatggcgtcagctgacaaaggaaatccagctgaca
tcgcaaatagcaaaaacataccgatgtggtatgaaactgaacaattctactaagattgag
ggctcggaccagtgttccatgcctgaggatctgagagttgctgaagtttcagaccattgg
tggtactccatgctcatcctccctcctttgcttaaagatagtgtggcagctccttttctc
tctgcgtactatccagactgagtaggcatgagtccctcttgtaccagcactaaccgatta
cttggtgaatccaacgctgtgaagttagagcacataaagagtgcacctaatgtagctggg
atgaacagatacttccagcccttctaccagcccaatgaatgtggtaaagcactttgtgtg
agaccagatgtcatggaattagatgagctctatgagttcccagaatattcacgagatcct
accatgtacctagctttgagaaacctcatcctgtctttgtggtacacaagttgcaaagaa
gttcttacccctcacaaatgtactcatcgcatcattgtgcgggggcttgtgcgtattcgc
tgtgtccaagagatggagaggatactttattttatggcacgaaaagggctgattaataca
gggattttgtcagtcagttctgaccaacatcttcttcccaaagaataccacaataaatct
gtcattattgttggggctggtccagcaggattagcagctgcaagacaactgcacaacttt
ggaattaaggtcattgtgctagaagcgaaagacagaattggcgggcgtgtgtgggacgat
aggactttcaaaggagtcactgtaggaaaaggagcacagatcgtgaatggctgtgtcaac
aacccgatagcactaatgtgtgagcaacttggcattaaaatgcacaaactaggggagaga
tgtgatttgatccaagaaggtggaaggataactgaccccactatagataagcgcatggac
tttcatttcaatgccatcctggatgttgtctcagaatggagaaaagataagacccagcat
caagatgtccctcttggagagaagatacaggagatctataaggcttttattcaggagtca
ggtatccagttcagtgatttggaggaaaaagtactacagttccacctcagtaacttggag
tatgcctgtggcagtgacctccatcaggtatctgcacgctcatgggaccacaatgaattt
tttgcccagtttgctggagatcacacccttttaacaccagggtattctaccatcatagat
aaactggctgaaggggttgatgttcgacttaagcttccggtacacagtatagactattct
ggggaagaagtccaggtcactacagcagatggaactgtgtggacagcacaaaaggttttg
gttacggtgccactggcccttcttcagaaaaatgccattcagtttaatccaccactgcca
gagagaaaaatgaaagccattaacagtttgggagcaggagtcattgagaaggttgccttg
cagtttccttatagattttgggacagcaaaattcaaggagctgatttttttggtcacgtt
ccacctagttccagcaaacgtgggcttttcagtgtgttctatgacatggatccacagggt
aaatatagtgttctaatgtcagtagttaccggagatgctgtgacaaccattaagaattta
gatgacaaacaagtactacaactatgcatgactgtacttcgagagctgtttaaggagcag
gaagttccagacccagttaagtactttgttacacgatggaacaaagatccctggatccag
atggcatatagttttgtaaagacaggtggcagtggtgaggcttatgacgttatagctgaa
gacctacaaggaacaatcttctttgctggtgaggccacaaacaggcactttccacagacc
gttactggagcttacctgagcggcgttcgagaagcaagcaaaatagcagcattttga
DBGET
integrated database retrieval system
