Chelonoidis abingdonii (Abingdon island giant tortoise): 116822825
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Entry
116822825 CDS
T07367
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116822825 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116822825 (NHLRC1)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116822825 (NHLRC1)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116822825 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
Baculo_IE-1
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
Prok-RING_4
zf-C3HC4_2
RING_XB3-XBAT31
DUF4668
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116822825
NCBI-ProteinID:
XP_032632854
Ensembl:
ENSCABG00000002076
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MAASRRKHSIINNPLKAATMSARAPDRMQIMTELVNETEVSLLECKVCFEKYSQKKKHRP
RNLPCGHVICLECVFSLAHPRNFRLECPFCRRACKSSETSDCLPLLHLIEILSPATNIPL
ASGTTTGVGDEAAVSASLGLTFNLSFGGWGTLINPTGIAMCRRSDCVVVAHDGKKRIKLF
GLSGSCMQEFGERGDAGNDIKYPLDVTVTLDGHVVVTDSGDHSVKVFDFNGRGKLIIREY
FCLPWGLDTTPENEIILSDPEAGALCRLTANFRKGELKKVQKIQSNLCHPREVAVSQTNG
IIAVIEHLTAKGPNYSSTSVKIFSADMKLIGQMDSFGLNLVFPSKIYATALAFNREGHII
VADAYNQVVLCLGKPEEFPILRPIITQGLSYPVALTYTANNSLIVLDSGDHSIKIYTAS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcacgtcgcaagcacagtataatcaacaatcctcttaaagctgcaactatg
tctgccagggcccctgatagaatgcaaattatgacagaactggtgaacgaaactgaggtc
agtctacttgaatgcaaagtgtgttttgaaaaatatagccagaagaagaaacaccggccg
aggaacttgccctgtggacatgttatatgcttggagtgtgtattctctctagcacaccca
aggaattttaggttggagtgccctttctgtcgaagagcttgcaaatcctcagagacaagt
gactgcttaccattgctgcacctgatagagatcttaagtcctgcgactaatattccttta
gcttcaggaacaacaactggcgtaggtgatgaagcagctgtatcagcatctctaggctta
acattcaacctttctttcggaggctgggggacgctgatcaatccgactgggattgcaatg
tgtcggcggtctgactgtgtagtagtggcccatgatggcaaaaaaaggattaagctgttc
ggcttgagtggaagctgtatgcaggagtttggggaaagaggagatgcaggcaatgatatt
aaatacccacttgacgtgacagttacattggatggccatgtggttgtcacagacagtgga
gatcactctgtgaaagtgtttgattttaatggaagaggcaagctaattatcagggaatac
ttttgtttaccatggggtttggataccaccccagagaatgaaattatcctgtctgatcca
gaggcaggtgctctttgtcgcttgacagccaattttagaaaaggagaactaaagaaggtt
caaaagatccagtctaacttatgtcacccaagagaggtggcagtttctcagactaatgga
attattgctgtaatagagcacctgacagctaagggaccaaactacagcagcacaagtgtg
aagatattcagtgctgacatgaaactcattggccagatggatagctttggtctgaaccta
gtgtttccctccaaaatatatgccactgctttggccttcaacagagagggacacataata
gtagcagatgcctataaccaagttgtattgtgcttgggaaaacctgaggaatttcctatc
ttaaggcccataattacccaagggctttcttatcctgtggcattgacttacacagcaaac
aattctctgattgtcttagacagtggtgatcattcaattaaaatatatactgctagctga
DBGET
integrated database retrieval system
