Chelonoidis abingdonii (Abingdon island giant tortoise): 116822881
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Entry
116822881 CDS
T07367
Symbol
UFD1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116822881 (UFD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabi03009
]
116822881 (UFD1)
Ribosome biogenesis [BR:
cabi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116822881 (UFD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
116822881
NCBI-ProteinID:
XP_032632947
Ensembl:
ENSCABG00000020940
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERHTQHEESTDVEADHSGYVSDLGFRAFSGSGNRLDGKKK
GVEPSPSPIKPGDIRRGIPNYDFRIGRITFIRNSRPLVKKVEEDDSGSRFIAFSGEGQSL
RKKGRKP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttttaatatgtttgatcatccaatcccccgggttttccagaaccgcttctca
acccagtatcgttgcttctcagtgtccatgcttgcaggacctaatgacaggtcagatgtg
gagaaaggcgggaagataattatgccaccatccgccttggatcaactcagtcgacttaac
attacataccctatgttatttaagctgactaataaaaattcagatcgaatgacgcattgt
ggtgtgctagaatttgtggctgatgaaggcatttgttaccttccacactggatgatgcag
aacttgcttctggaggaaggaggcctggtgcaagtagagagtgttaaccttcaagtggct
acttactcaaaattccaaccacaaagtccagatttccttgacatcaccaatcccaaagct
gtattagaaaatgctttgagaaactttgcttgtctaaccactggggatgttattgccatc
aactacaatgagaagatctacgagcttcgggtaatggagaccaagcctgataaagctgtg
tccatcatagagtgtgatatgaatgtggattttgatgcacctttgggatacaaagaacca
gaaagacacacacaacatgaggagagcacagatgttgaagcagaccacagtggctatgtg
agtgacctaggatttcgtgcattctctggctctgggaacaggctagatggcaagaagaaa
ggtgttgagcctagtccctcgccaattaaaccaggagacattcgaagaggaatacccaat
tatgacttcagaatcggtaggatcacattcatcagaaattcacgaccactagtcaagaaa
gttgaagaggatgactctggcagccggttcattgcattttcaggagaaggccagtccttg
cgcaagaagggaagaaaaccataa
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