Chelonoidis abingdonii (Abingdon island giant tortoise): 116822980
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Entry
116822980 CDS
T07367
Symbol
SNTB1
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116822980 (SNTB1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
116822980
NCBI-ProteinID:
XP_032633126
Ensembl:
ENSCABG00000004712
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MAVAAAAGGGGRGQQRSGWLEVLVRDRWHKVLANLGEDALVLSCEERADGAAHNGVGSSG
NGAPYRGAAAGRGSQPGTRXPSGAEPLGGGGGSSPKAGAGPGVRTAFTELPEQVPDAISN
KKRCVKVQKQELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILAVNGTDL
RDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGISSD
PLSQLSLAIQRDKKTIPLKMCYVTRNMAVSDPENRLLEVHSPDAKHTVVLRSKDSATAQA
WFNAIHSSVSDLIPRVISEVKDQLGKSGIAGSREIRHLGWLAEKVPGENEKHWKPALVVL
TEKDLLIYDSMPRMKEAWFSPLHTYPLLATRLVHSGPGKGSPQSGVDLSFATRTGTRQGI
ETHLFRTETSRDLSLWTRNIVQGCHNSAELITEITTSCTYKNQECRLTIHYEHGFSLTVE
PQDGALSKTIAQCPYEKLKMSSDDGIRMLYLDFGGKDGEFQLDLHSCPKPIVFIIHSFLS
AKITRLGLVA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcagcggccggcggcggcggccgggggcagcagcggagcggctggctg
gaagtcctggtgcgggaccgctggcacaaagtcctggccaacttgggcgaggatgccctg
gtgctgagctgcgaggagcgcgccgacggcgcagcccacaacggcgtcgggtccagcggc
aacggggcgccctaccgaggggctgccgctggccgcgggagccagccgggcacgcgcnna
cccagcggcgccgagcccctgggcggcggcggcggcagcagccccaaggcaggggctggc
cccggggtgcgcaccgccttcaccgagctccctgagcaagtgcccgacgccatctccaac
aagaagcggtgcgtgaaggtgcagaagcaggagctgggcgggctgggcatcagcatcaag
ggcggcaaggagaacaagatgcccatcctcatcagcaagatcttcaaggggctggcggcc
gaccagacccaggccctctacgtgggcgatgccatcctggccgtgaacgggacggacctg
cgggacgccacccacgacgaggcggtgcaggcgctcaagcgggcgggcaaggaggtgctg
ctggaagtgaaatacatgcgagaggcaaccccatatgtgaagaaaggttctccagtttca
gaaattgggtgggaaacccctccacctgaatctccacggttaggaggtatatcctccgac
ccactgtcgcagctttctctcgccatccagagagacaaaaaaacaattccactcaaaatg
tgctacgtgacgcgcaacatggctgtgtcagatcctgaaaacaggcttcttgaagtccat
tcacccgatgccaagcacactgtggttctaaggagtaaggattcagccacagcccaggcc
tggttcaatgctatccactccagtgtgagtgatcttattcccagggtgatttcagaggtg
aaagaccagctgggtaaaagtgggatcgctggaagtcgagagattaggcatctaggctgg
cttgcagaaaaggtgccaggagagaatgagaagcactggaagccagcactggttgtactg
accgagaaagaccttttaatatatgacagcatgccacgaatgaaagaagcttggttcagc
cctctccatacttaccctctgctagccaccaggttggtccattcaggtccaggtaaggga
tccccacaatctggggtggatttatcttttgcaacgcgcaccggtacaaggcaagggatt
gaaacccatctcttcaggacagagactagcagagacctctcactgtggacaaggaacata
gtgcagggctgccacaattcagctgagctcatcacggaaatcacaacctcttgcacctac
aaaaaccaggagtgccgtttgaccatccattatgaacatggattctctctcacagttgaa
ccacaagatggtgccttgtccaaaacaattgcacagtgtccctatgaaaagctaaaaatg
tcttcagatgatggcattaggatgctttatttagacttcggaggcaaagatggagaattt
cagctggaccttcattcttgtccaaagccaattgtgttcatcattcattcattcctttca
gctaagattacaagacttggtttggtggcgtaa
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