KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116823100
Entry
116823100         CDS       T07367                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cabi03036]
    116823100 (KDM4B)
Enzymes [BR:cabi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     116823100 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     116823100 (KDM4B)
Chromosome and associated proteins [BR:cabi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116823100 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF7141 Tudor_5 SLX1_C
Other DBs
NCBI-GeneID: 116823100
NCBI-ProteinID: XP_032633375
Ensembl: ENSCABG00000002336
UniProt: A0A8C0G791
LinkDB
Position
Unknown
AA seq 1122 aa
MGSENPSPQNPGCKIMTFRPTLEEFRNFGKYVAFIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDGAVLDHMKPTALTSPELDAWNE
TKPELKAKLLRRMGDEEEDNKQNYRAHRKRSQPRRHKTEDQKSLGEVIAMETALEEVKMK
EEVKRGPDLDEEERSKVTEGGEGDSKVKGRPPKVKGERKKKHPHHQHHHHHSHHLQPPQP
PLQQQLLPPPPPQPQQQPAEEEASAAQPLIPVAAPASATPEKSLPSAPLNIVLPSEVPSE
EDDFKPRPIIPMLYVVPRTKKVVFEKERISCQQAFEQFATQKGQFWREQGVPLELTVKEE
ESGEAENADVAPEVSDLQATSAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQEASSDEET
FPFSGEEDVSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSL
QMDKEAVQVSIGESSSLLQLSKCGQKTKPLIPEMCFTSGGENTEPLPSNSYIGEDGTSLL
ISCAKCCLQVHASCYGIRPDLVNEGWSCSRCSANAWAADCCLCNLRGGALQMTTDGRWIH
IICAITVPEARFLNVIERHPVDISSIPEQRWKLKCVYCRNRMKKVSGACIQCSFEHCSTS
FHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANHNIPFRREVSLGQTVITKNRNGLYYKC
KVIGMTTQTFYEVNFDDGSYSDNVYPESITSRDCIQMGPPPEGELVQLQWTDGIIYKAKF
IAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEGVFSGDEVKA
AKRPRVGNSRNPEDYGQNPDYLAFMETLLQTQYQPGPQSNMF
NT seq 3369 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccacagaaccctggctgtaagatcatgaccttccgtcct
accctagaggagtttcggaactttgggaaatatgttgccttcatcgaatcgcagggagct
catagggcagggcttgccaaggtgattcctccgaaggaatggaagccccgaaagacttac
gatgacatcgatgacatggtcatcccagcgcctatccagcaggtggtgactgggcagtcg
ggattattcacccagtataatatacagaagaaacccatgacggtgggagaataccggcgt
ctggccaacagtgagaagtattgtactcctcgtcaccaagattttgaagacctggaacgc
aaatactggaagaatctgacattcgtctcaccaatttatggggcagatatcagtggctca
ctatatgatgcagatgtagaagaatggaatattgggaatctgaacaccctgttggacatg
gtggagcatgaatgtgggattatcatagaaggtgtgaacaccccctacctttatttcggc
atgtggaaaacaacatttgcatggcatactgaggacatggatctctacagcatcaactac
ctacattttggggagccgaaatcctggtatgccataccaccagaacacggcaagcgattg
gaacggctggcaaaaggatttttcccaggaagctctcagggatgtgatgccttccttcgc
cacaagatgaccctcatttcaccctccatcttgaagaaatatggcatcccatttgaccgg
atcacccaagaggctggagagtttatgatcacatttccttacggctaccacgcgggattc
aaccacggcttcaactgtgctgagtccaccaactttgccacattgcggtggattgactat
ggcaaaatggctacacaatgcacttgccgcaaagacatggtgaagatttccatggatgtt
tttgtgagagttctacagccggaacgttatgacttatggaaacaagggaaagatggtgct
gttctggaccacatgaaacccacagctctgaccagcccagagctggatgcctggaatgag
acaaagcctgaactgaaagctaagctgctccgcaggatgggagatgaagaagaggacaac
aaacaaaattaccgagctcacagaaaaagaagtcaacccagaaggcataaaacagaggat
cagaagtctcttggggaagtcatagctatggagactgccctggaagaagtaaaaatgaag
gaggaggtgaaaagaggaccagacctagatgaagaagagagaagtaaagtgactgagggg
ggagaaggagacagtaaggtaaagggccgtcccccaaaagtaaaaggtgagagaaagaag
aagcaccctcaccatcagcaccaccaccatcacagtcatcacctgcagccaccacagcct
cctttgcagcagcagctgctgccaccgcctcctccacagccacagcagcaaccagcagag
gaagaggcatcagcagcacagccactgattcctgtagcagcaccagcatctgccacgcca
gagaagagcttaccctctgctcccctcaacatcgtcctgccctcagaggtaccaagcgag
gaggatgactttaagccccgacccatcattcccatgctttatgtggttccacggaccaaa
aaggtggtctttgaaaaggagcgcatatcctgccagcaggcctttgagcagtttgccaca
caaaaaggccagttttggcgggagcagggggtccctttggagctcactgtgaaggaggag
gagagtggagaagcagaaaatgcagatgttgcccctgaggtcagtgacttacaggccaca
tctgctttttcaaaaatgaagatggagataaagaaaagtcgccgtcacccgctgggcaaa
ccaccaacccgctccccattgtctgtggttaagcaggaggcctcaagtgatgaggaaacg
tttccgttttccggggaggaggatgtgagtgacccagaggctttgaagtctttactttcc
ctgcagtggaagaataaagcacataacttcccagctgagcgaaaattcaatgcagctgct
gccctgagcgagccctactgtgctgtctgcaccctcttctacccttataaccagtcgtta
cagatggataaagaggctgtccaggtctccataggggagagctcctccttgctccagctt
tcaaagtgtggacagaagacaaaacctctgatccctgagatgtgctttacctcaggtggg
gaaaacacagagccccttccttcaaactcgtatattggagaagatggaaccagtctcctg
atatcctgcgccaagtgctgcctgcaggttcatgctagttgctatggaatacgccctgat
ctggtgaatgaaggctggtcttgttcccggtgctcagccaatgcatgggcagcggactgc
tgcctgtgtaatctcaggggaggagctcttcaaatgaccactgatgggaggtggatccat
ataatctgtgctatcactgtcccagaggcccgtttcctcaacgtaatagagcgccatcct
gtggacatcagttctattccagagcagcggtggaaactgaaatgtgtgtactgccggaat
cggatgaagaaggtatctggtgcctgcattcaatgctccttcgagcactgctccacttcc
ttccatgtgacctgtgcgcatgctgctggggtacccatggagccggatgattggccatat
gttgtgtccatcacttgcttcaaacataaagcagccaaccacaatatcccgtttcggagg
gaggtatcgctgggacagaccgtgattacgaagaaccgcaatggactctactacaagtgt
aaagtaatcggcatgacaacacaaaccttctatgaagtgaactttgacgatggctcttac
agcgataatgtttacccggaaagcattactagcagagactgcattcagatgggaccgcct
ccagaaggcgagttggttcagctgcagtggactgatggaatcatctataaggccaagttc
attgcagcccagatcagtcagatttatcaggtggagtttgaagatggctcccagctgatg
gtaaaacgtggtgatatttacacattggaggaggagcttcctaagagagtgaaatctcgc
ctgtccctcagcactggggcccctcaggaaggagtgttttcgggagatgaagtgaaagcg
gccaagcgcccccgagtggggaattccaggaatcccgaggattatggacagaacccagat
tatttggccttcatggagaccctgctgcagacgcagtaccagccaggaccacagagtaac
atgttttaa

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