Chelonoidis abingdonii (Abingdon island giant tortoise): 116823217
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Entry
116823217 CDS
T07367
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04120
Ubiquitin mediated proteolysis
cabi04144
Endocytosis
cabi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116823217 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116823217 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
116823217 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116823217 (NEDD4)
04121 Ubiquitin system [BR:
cabi04121
]
116823217 (NEDD4)
03029 Mitochondrial biogenesis [BR:
cabi03029
]
116823217 (NEDD4)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116823217 (NEDD4)
Membrane trafficking [BR:
cabi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116823217 (NEDD4)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
HECT type E3
116823217 (NEDD4)
Mitochondrial biogenesis [BR:
cabi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
116823217 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
116823217
NCBI-ProteinID:
XP_032633526
Ensembl:
ENSCABG00000012228
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MAQRLRLHFAAQRSNTDPLSEISGDGLDGNVLVYFQRPSRNSAPDIIQIKVIPRQAVFPT
VMQKIINQQQHSTVSSLQKNNKKSTSLQISLQSRRYSDCFQSDTVVASEDTFISVGNEGN
ACNRNMADYRSNMLNSSSHLSNTTMCTGNLDSVAANNSGSLSSTGSDYESCTGIASDGGS
YSNSIISDCSSCTLSTGDDICSSIVYSTSSYRSTANKCNSYRNNIYEEDLCRSKNTTFDQ
DGLEQVKLPMRRKTKIPLRRFSSLVIFPRSPSTTPPTSPTYLGPLPSRGSYQTSHQFVIS
STELAHNEDQRTSSKGFLSTAVNGLRLSKTICSPGETRDIRPFYLNNALQDKNQAASSAE
QTTCKKISNSFPCISVHFTQQRESASRDEMVNGCYSPELSKKELNLHSDAKYPNLKLILS
TSACLPSKKHSEYQILINELERPNTQMRTTHHILQRSVSLEGSCQKVSCCLSSLKYKCPK
AETSQLHIQFTPGNEGKTRGFPKNASICKRESNSTLWRPHKTRDDFLGQVDVPLHQLPTE
NPNMERPYTFKDFVLHPRSHKSRVKGHLRLKMTYLPKNNGSEEENTEQVEDLEPGWIILD
QPDAACQQQQESPPLPPGWEERQDILGRTYYVNHESRRTQWKRPTAQDNLADVDNGNIHL
EAQHAFTHRRQITEEAENLDNRDSPESWEVITEDEATMYSNQNLQTLLPQSSSDMQSHLA
EELNIRLTTSGSPATGQSTSSNNHSSRRGSLQTYRVEEQPALPVLLSTSSGLPPGWEERQ
DEKGRSYYIDHNSRTTTWVKPVVQTTIETSQLSTVQSTPTGRQPQTSSDSSEQSSNQQPE
VEQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPAHLRKKTSLDPVDLGPLPPG
WEERTHTDGRIFYINHNTKKTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSD
IPNRFEMKLHRTTILEDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSK
EMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIR
PFYKMMLQKPITLHDMESVDSEYYNSLRWILENDPAELDLRFIVDEELFGQTHQHELKSG
GSEIVVTNKNKRDYIHLVIQWRFVSRVQKQMAAFKEGFFELISQDLIKIFDENELELLMC
GLGDVDVADWKLYTKYKNGYSINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGF
AELYGSNGPQLFTVEQWGTPEKLPRAHTCFNRLDLPPYESFEDLWDKLLIAIENTQGFDG
VD
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacggttaagattgcattttgcagcccaaaggagcaacactgatccattatca
gaaatctctggagatggtttggatggtaacgttcttgtgtatttccaaagaccttcacgg
aattctgcacctgatattatacaaattaaggtgattcccaggcaagctgtctttccaacg
gtaatgcagaaaataattaatcaacagcagcattcaactgtttcttcattgcaaaagaac
aacaaaaagagcacctcactgcagatttccctgcagtctagaaggtatagtgactgtttt
caatctgatacagtagttgctagtgaagacactttcatcagtgttggtaatgaaggaaat
gcttgtaacaggaatatggctgattacagatctaatatgctaaacagtagcagccatttg
agcaatactaccatgtgcactggcaatcttgacagtgttgcagcgaataacagtggatcc
ctcagtagcactggcagtgactatgaatcgtgtacaggtatcgctagtgatggaggctca
tacagcaacagtataatcagtgactgtagtagttgcactctttccactggtgatgatatc
tgtagcagtattgtatatagtacttcttcatatagaagcacagcaaacaaatgtaattcc
tataggaacaatatatatgaggaagatttatgtagaagtaaaaatactacttttgatcaa
gatggtttggaacaagtgaaattgccaatgaggaggaaaactaaaattccactacgacgt
ttttcatctttggtcatctttcctaggagtccttccactaccccaccaacttctccaaca
tacttgggtcctctaccaagcaggggatcttatcaaacatcacatcagttcgttatttct
tctactgaactggcacataatgaagatcaaagaacttcttctaaagggttcctttcaaca
gcagtcaatggacttcgactatctaaaaccatttgctctcctggtgaaactagagacatt
agaccattttacttgaataatgcattacaggacaaaaatcaggctgcaagtagcgctgag
cagacaacttgtaaaaaaatatccaacagcttcccttgtatttcagttcatttcactcag
caaagagaatctgcatcaagggatgaaatggttaatggttgctacagtccagagttatca
aaaaaggaattaaatttgcactctgatgcaaagtaccctaatttaaaactgatacttagc
acatctgcatgtttaccctcaaaaaaacattctgagtatcagattcttataaacgaatta
gaaagaccaaatacacaaatgaggacaacccaccatattctgcaaagaagtgtttcatta
gaaggatcttgtcaaaaagtttcttgctgtttatccagtcttaaatacaagtgtcctaag
gcagagacatcccagttgcacatacagttcacacctggaaatgaaggaaaaactcgtggc
tttccaaaaaatgctagtatctgcaaaagggaatcaaatagtactttgtggaggccccac
aagacaagagatgacttcctaggtcaagtggatgttcctcttcatcaattaccgacagaa
aatccaaatatggagagaccatacacctttaaagattttgttcttcatccaagaagtcac
aagtcaagagttaaaggtcacctaagattaaaaatgacatatttacctaaaaacaatgga
tctgaagaagaaaacacagaacaggtggaagacctggagcctggctggattatattggac
caaccggatgctgcttgccagcagcaacaggaatctcctcctctacctccaggctgggaa
gaaagacaagatatccttggtaggacctactatgtcaaccatgaatctagaagaacacaa
tggaaaagaccaactgctcaggacaatctcgctgatgttgacaatggtaatattcatttg
gaggcacagcatgcatttacccatcggcgacagataacagaggaagcagaaaatctagac
aacagagattctcctgagagctgggaagttataacggaagatgaggccactatgtacagc
aatcagaatcttcaaacactactgccacagagcagttctgatatgcagtctcacctggca
gaagaattgaatatcagacttactacctctgggagtccagccactggccagtcaacttcc
tccaataaccattccagcagaagaggtagcctgcaaacatacagagttgaggaacagcct
gcacttcctgtgttactttctacttcatctggattacctccaggctgggaagaaaggcaa
gatgaaaaaggaaggtcatattatatagatcacaattccagaacgactacctgggtaaaa
cctgttgtgcagactacaatagaaacaagtcaactatcaactgtccaaagtactccaaca
ggacgtcaaccacaaacatcaagtgattcatcagaacagtcttctaatcaacaacctgaa
gtagagcaaggatttctccctaaaggctgggaagtccgacatgcaccaaatgggagacca
ttctttattgaccacaataccaaaactactacatgggaagatccaagattgaaaattcca
gctcatctgaggaaaaagacatctctagatcctgtagatttaggccccttgccaccagga
tgggaagagagaactcacacagatggaagaatattctacataaaccacaatacaaaaaaa
acgcaatgggaagatcctcgattgcagaatgtagcaataaccggaccagctgtgccttat
tccagggattataaacgaaagtatgaattcttcagaaagaagttgaagaagcagagtgat
attccgaacagatttgaaatgaaacttcaccgtacaacaatccttgaagattcttacaga
agaattatagctgtaaagagagcagatttccttaaagcaagactctggattgagtttgat
ggtgaaaaaggcttagattatggaggagtggccagagaatggttcttccttctctctaaa
gaaatgtttaatccctattatggattgtttgaatattctgccacggataactacactctg
cagatcaatccaaactctggattgtgcaatgaagatcatctctcgtacttcaagtttata
ggacgtgtagctggaatggctgtttaccatggcaagctgctggatggcttttttattcga
cctttttacaagatgatgcttcaaaaaccaataacgcttcatgatatggaatctgtggat
agtgaatattacaattctctgagatggattcttgaaaatgatccagcagaattggatctt
aggtttattgttgatgaagaactctttggacagacccatcaacatgagctaaaaagtggt
ggatcagaaatagttgtcaccaacaagaacaagcgggactacattcatcttgtaattcag
tggagatttgtgagcagagtccagaagcagatggctgcttttaaagaggggttttttgaa
ctaatatctcaagatctaatcaaaatttttgatgaaaatgaactagagttactaatgtgt
ggactgggagatgtggatgtggctgactggaagctatatacaaaatacaaaaatggctac
agcataaatcaccaagttatacagtggttttggaaggcagtgttaatgatggattctgag
aagcgaataagattacttcagtttgtcactggcacatcccgtgtacctatgaatggattt
gctgagttgtatggttcaaatggaccacagttgtttacggttgaacagtggggcacccct
gaaaaactgccaagagctcatacctgctttaaccgcttggatttgcctccatatgagtca
tttgaagatttatgggacaaacttctcatagcaattgaaaatactcagggttttgatggg
gttgattag
DBGET
integrated database retrieval system
