Chelonoidis abingdonii (Abingdon island giant tortoise): 116823242
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Entry
116823242 CDS
T07367
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cabi03032
]
116823242 (PIF1)
03029 Mitochondrial biogenesis [BR:
cabi03029
]
116823242 (PIF1)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
116823242 (PIF1)
DNA replication proteins [BR:
cabi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116823242 (PIF1)
Mitochondrial biogenesis [BR:
cabi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
116823242 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
AAA_7
Mg_chelatase
RsgA_GTPase
ABC_tran
AAA_16
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
116823242
NCBI-ProteinID:
XP_032633582
Ensembl:
ENSCABG00000012557
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MQGAELDARIRCSVTIERLSPSGQAPKRRVIRDASLALGRNEFRELVLQVSDGSAPQSFA
LRGEVRLFTRFLRDGKSGLQLGPAQVQLLIANCPPDSLRRFLRLLRIKYETAGKGAKTVT
ERARLLCSLPRTFDTISPVQARDMQQVCDQRTHASCEATPVKGQAPRDRGNSGLWSKSRK
RARTESAEASNVRDPQEADMKCSKKLSLLMHSRMRLSQEQSIVLSAVLSGKNVFFTGSAG
TGKSYLLKKIVGSLPPKSTYATASTGVAACHVGGTTLHAFAGIGSGKVPLNQCIELAQRT
GVRQHWLSCQHLIIDEISMVEGKFFDKLEAVARAVRKRDDPFGGIQLIICGDFLQLPPVS
KGNEETKFCFQAESWRRCIHVNMELTEVWRQTEKSFISLLRTIRLGRCTDEVTRQLLQTA
TNRVERDGILATRLCTHKDDVELTNERRLQQLPGEMHSYEAVDSDPMLVKAIDAQCPVSH
CILLKPGAQVILTKNLDVSRGLVNGARGVVVEFETEGNGLPRVRFLCGVTEVIRLERWVF
KGPSGIYLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLEGL
RVLDFDPNVVRANPYVLQFYNHLQKEQLLSQASLHRYTEAEEKENWKSS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcgcggagctggacgctcggatccgctgcagtgtcactatcgagcggctgagc
ccgagcggccaggcaccgaagcgccgggtgatccgcgacgcctccctcgccctgggccgg
aacgagttccgggagctggtgctgcaagtgagtgacggcagcgcgccgcagagcttcgcg
ctgcgcggggaggtgcggctcttcacgcgcttcctgcgcgacgggaaaagtggcctgcag
ctgggccccgcgcaagtgcagctgctgatcgctaactgcccccctgacagcctcaggcgc
ttcctccggctgctgcgcatcaagtacgagacggcggggaagggggcgaagaccgtcacg
gagcgggcgcggctgctgtgcagccttccgcggaccttcgacaccatcagcccagttcag
gcgcgggacatgcagcaggtctgcgatcagcggacccacgcgagctgcgaggcgacgcct
gtgaaagggcaggcccctagagaccgagggaacagcggtctgtggagcaagtcgcggaaa
agagccaggacagaatccgctgaagcaagcaatgtaagagatccccaggaagctgacatg
aaatgctcaaagaagctatctctgctaatgcattcacggatgagactctctcaggaacaa
tccattgtgctgagtgcagtgctgagtggaaagaacgtcttctttacaggcagtgctggg
actgggaagtcatatctgctgaaaaagattgtgggttcgctcccaccaaagagcacctat
gctacagccagcacaggagtggcagcttgtcatgttggtggcaccacgctccatgccttt
gcaggtattggttctgggaaagttccgctaaatcagtgtattgagttggctcaaagaact
ggagtgcgtcagcattggttgagctgccaacacttaattattgatgagatttcaatggtg
gagggcaagttttttgataagctggaggcagtagccagagctgtcaggaaacgggatgac
ccatttggaggaatacagctgatcatctgtggggacttcttacaactgccaccagtcagc
aaaggcaatgaggaaaccaagttctgcttccaggcagagagctggaggagatgcatccat
gtgaacatggaactgacagaagtgtggagacagactgaaaagagcttcatctcactcctg
cgtacaatccgcctgggcaggtgcacagatgaagtcaccaggcagctgctgcaaacagct
accaacagggttgagagagatgggatccttgcaactcgtctctgcacccacaaggatgat
gtggaactaacaaacgagagacggttgcaacagttaccaggagaaatgcactcctatgag
gctgtggatagtgatcccatgctagtcaaagcaattgatgctcagtgtccagtaagtcac
tgtattctgttgaaaccaggagcccaggtgattcttactaagaacctggatgtgtcccgg
ggtctggtgaatggggcaagaggggttgtggttgaatttgaaactgaagggaatggactg
cccagagtgaggtttctttgtggggtcacagaggtaatcaggctggagcgatgggtcttc
aaaggtccatctggaatttatctgagtcgtcaacagttgcctctaaaattggcatgggcc
atatccatccacaagagccagggcatgtcattagactgtgtggagatctccctgtctcgt
gtctttgaaagtggtcaggcttatgtagccctttcccgagcccgtagccttgagggcctc
cgggttttggattttgatcccaacgttgtgagagccaatccgtatgtgctacagttctac
aatcacttacagaaagaacaacttctatctcaggcttctctacacagatacactgaagca
gaggagaaggagaattggaaatctagctga
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integrated database retrieval system
