Chelonoidis abingdonii (Abingdon island giant tortoise): 116823779
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Entry
116823779 CDS
T07367
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116823779 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116823779 (MYO5C)
04131 Membrane trafficking [BR:
cabi04131
]
116823779 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cabi03029
]
116823779 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cabi04812
]
116823779 (MYO5C)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116823779 (MYO5C)
mRNA cycle factors
P-body specific factors
116823779 (MYO5C)
Membrane trafficking [BR:
cabi04131
]
Others
Actin-binding proteins
Myosins
116823779 (MYO5C)
Mitochondrial biogenesis [BR:
cabi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116823779 (MYO5C)
Cytoskeleton proteins [BR:
cabi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116823779 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Csm1_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
116823779
NCBI-ProteinID:
XP_032634499
Ensembl:
ENSCABG00000012060
LinkDB
All DBs
Position
Unknown
AA seq
1741 aa
AA seq
DB search
MAMAELYTQYNRVWIPDNEEVWQSAEITKNYRTGDHVLHLLLEDGTELNYPVDPAPLPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSVIVSGESGAGKTVSARYAMRYFAT
VSKSNSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQTHQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASALQPEFKHLKLGHAEEFNYTRMGGNTIIEGVDDR
ADMMETQKTFTLLGLKEDFQMDVFKILAAILHLGNVQMTAVGDEKSSVSLEDKHLNIFCE
LLDLDNDKVAQWLCHRKIITTSETVIKPMTKLQALNARDALAKKIYSHLFDFIVERINKA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPQGTDENWLQKLYNNYINKNPFFQKPK
MSNTSFIIQHFADKVEYKSEGFLEKNRDTVYEVLIDILRNSKFHLCANFFRDRPVPISPF
RSTITVKSAKTVVKPPNKQFRTTVGSEFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRVVQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQHELSLSDKKKICKTV
LQQLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACIVIQKNIRSWHQRKKFLRIK
QAAVTIQQYFRGQRAVRQAVTATALKQAWAAIVIQKYCRGYIVRKLCQLIHVAAITIQAY
VRGFLARKKFRKMLKEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKLED
QNKENHGLLERLTHLASAHANDLDTIQKLELELEKLATQKKTSEEKGKKYKEDTEQKLSK
LEKQNAELQEQKTFLEQKLQEETKEMKDKMDDLTKQLFTDVQQEEKQRIMLEKKFQNEKQ
DYEKEIESLKGEIKTLREEKIKLQGQIQEEHIIQDDLKLEVGQLKKQAKMIPELQKEIEL
LQTQKMDVEKQVQSQKREMREKVSEVAEQFMESYDVEAIRSRLSIEDLEHLNEDGELWFA
YEGLKKATRVLESQFQSQKENYEKEIEALNFKVEHLSQEIIHLQKLFREENDINDSIRLE
VSRLTSENMMIPDFKQQISELQKQKMDLEQHLQEQTAKMKGKMEEMPNQVHHNLSEEGQR
RTLEEQTETHTKEKKQIVTIQDIQETNNHLKEQREIENEVKSKIKQEAFHLTLENMDLEE
ELDMKDRVIKKLQDQIKTLTKTIEKANETHVPALPPKEYIGMMEYRKEDEARIIKNLILD
LKPRGVVVNMIPGLPAYILFMCVRYADYLNDGDMLKSFMSMTTNGIKQVIKEHAENFEML
SFWLSNTYHFLNCLKQYSGEEEFMKQNTPRQNMNCLKHFDLSEYRQILSDLAIRIYHQFI
RVMENNIQPMIVPGMLEYESLQGISGMKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYST
MCQNGLDTELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKN
LQSSSAKETLEALSQAAWLLQVKKVTEDDAKEIYERCTSLSAVQIVKILNSYTPIDDFEK
RVSPSFVRKVQAMLNNREDIPQLMLDTKYLFQVTFPYTPSPHALEIIQIPSSFKLGFLTR
V
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggccgagctctacacgcagtacaacagggtttggatccctgacaacgaagaa
gtttggcagtctgctgaaatcacaaagaactatagaacaggagaccatgtgcttcaccta
ctattagaagatggaactgaattgaattaccctgttgatccagcacctttgccacctctg
cgaaatcctgacatacttgttggtgaaaatgacctcacagcacttagctatctccatgaa
cctgctgttctacacaatcttaaagttcgttttgtggagtcaaaacttatctacacttat
agtggaatcattttggttgcaatgaacccctataaacagttgccaatatatggggatgcc
attatccatgcatatagtgggcagaacatgggggatatggatccacatatatttgctgtg
gcagaagaggcttacaaacaaatggcacgaaacaacaggaatcaatctgttatagtcagt
ggagaatcaggagctggaaaaactgtgtctgctagatatgctatgagatattttgccaca
gtcagtaagtcaaacagcaatgcgcatgtggaggataaagttctggcatccaatccaata
acagaggctgtaggcaatgcaaaaaccacacgcaacgataatagcagtcggttcgggaag
tacactgaaatcagttttgatcagacacaccaaatcattggagccaacatgaggacgtac
ctgcttgagaaatccagagttgtctttcaatcagagaatgaacgaaattaccacatattc
taccagctgtgtgcttctgctctgcaaccagaatttaagcatcttaaattggggcatgca
gaagaatttaattatacaagaatgggcggcaacactattatcgaaggagtcgatgacaga
gcagatatgatggagacccagaagacattcactctactaggtctgaaggaggattttcag
atggatgtttttaaaatattggcggccatcctacacttaggcaatgtgcaaatgacagct
gttggtgatgaaaaatcttcagtcagtctggaggataaacatctcaatatattctgtgaa
cttctggatttagacaatgacaaagtggcacaatggttgtgccaccgaaaaattatcact
acctcagagactgtaataaagcctatgacaaaactccaagctcttaatgcaagggatgct
ttggcaaagaagatctattctcacctgtttgacttcattgtggaaagaattaacaaagct
ttgcatttttctggaaagcagcacacttttattggtgttttggacatttatggatttgaa
acttttgatgtgaacagttttgagcagttttgcatcaattatgctaatgaaaaactgcaa
caacaatttaacctgcatgtctttaaacttgaacaagaggagtatatgaaggaagacatc
ccatggactcttatagacttttatgacaaccaaccagtcattgaccttattgaagctaaa
atgggcattttagagctgctagatgaagagtgcttgttacctcaggggactgatgaaaat
tggcttcaaaagctatataataactatatcaacaagaaccccttctttcaaaagcccaaa
atgtcaaatacatcttttatcatccagcactttgctgataaggtagagtacaaatctgaa
ggatttctggaaaaaaacagagatacagtgtatgaggtattgattgacatcttgagaaac
agcaagtttcatctgtgtgcaaacttttttcgagaccgtccagtgcccatttcacccttc
cggtcaactataacagtcaaatctgcaaaaacggtggtcaagccacctaacaaacagttc
cggacgacagttggcagtgagttccgcagttctttgtatttacttatggaaacacttaat
gcaaccactcctcactacgtacggtgcataaagccaaatgatgagaagttaccatttgag
tttgactcaaaaagggtggtgcaacaactgcgagcatgtggtgttttggaaaccattcga
attagtgcccagagctatccatccaggtggacttacattgaatttttcagccgttacagc
attctcatgacgcagcatgaactctctttaagtgacaagaaaaagatttgcaagactgtt
ttgcagcagctaatccaggatcctaaccagtatcagttcgggagaacaaaaattttcttt
agagcagggcaggttgcttatttagaaaaactgcggtcagataaactgagacaagcgtgc
atcgtgatccaaaagaacattcgaagctggcatcaacggaagaaatttctccgtataaaa
caagcagctgttacaatacagcagtacttccgtggacagcgggctgtacggcaagctgtc
actgctacagctctaaagcaagcatgggcggctatagttattcagaagtactgtcgggga
tatatagtccgtaaactttgccagctcatccatgtggctgctataacaattcaagcttat
gtgcgaggatttctagcaaggaagaaattccgaaagatgctcaaggaacacaaggctgta
atccttcaaaaatatgcccgtgcttggcttgcaagacgcagatttcagaatattcggcga
tttgtgttgaatatccagctttcgtacagagttcagcgactgcagaagaaactggaagac
cagaacaaagaaaatcatggcttactggagaggctgactcacctggcttcggctcatgca
aatgacctagatacaatccagaaacttgaattagagcttgaaaagttagcgacacaaaag
aaaacctctgaggaaaaaggaaagaaatataaggaggacactgaacagaaactctcaaaa
cttgagaaacagaatgcagaactgcaagaacagaaaacattcttagaacagaagctccaa
gaggaaaccaaggaaatgaaagataaaatggatgacctcacaaaacaactgtttactgat
gtacaacaagaagaaaaacaaaggataatgcttgagaaaaagttccaaaatgagaagcaa
gactatgaaaaagagattgagtcattaaagggagaaattaagactctcagagaagagaaa
attaagctgcaaggtcaaattcaggaagaacatatcattcaggatgacttaaaactggaa
gtaggacaacttaaaaaacaggcaaagatgatacctgaattgcaaaaggaaattgaactg
ctccagacacagaaaatggatgtggaaaagcaagtccaatcccagaagcgagaaatgaga
gaaaaggtgtcagaagttgcagaacaatttatggagagctatgatgttgaggccataaga
agcaggctgtccatagaagatttggaacatttaaatgaagatggagaactttggtttgct
tatgagggcctgaaaaaagccacaagagtgttggaaagccaattccagtctcagaaagag
aactatgaaaaggagattgaagctttgaactttaaagttgaacatcttagtcaagaaatt
atccatttacaaaagttgtttagggaggaaaatgacataaatgacagcatccgacttgaa
gttagtagactaacatcggaaaacatgatgatccccgactttaaacagcagatttctgaa
cttcaaaagcaaaagatggatcttgaacaacaccttcaagaacaaactgcaaagatgaaa
ggaaaaatggaagaaatgcctaatcaggtgcatcacaatctgtcagaggaaggccaaaga
agaacactggaagagcaaactgaaacacacacaaaagaaaagaagcagattgtcacaatc
caagatattcaggagacaaacaatcacctaaaggagcaacgtgaaattgagaatgaagta
aagagcaagataaagcaggaggcatttcatcttactctggaaaacatggatcttgaagaa
gagttagacatgaaagatagagtaataaaaaaattgcaggatcagatcaagactcttacc
aagactattgaaaaagccaatgaaacacatgtgccagctctgcctcctaaggagtacatt
ggaatgatggagtacagaaaggaagatgaagcaagaattattaaaaatctcatccttgat
ctaaagccacgtggagtggtagtaaatatgattccaggcctaccagcttacatcctgttc
atgtgtgtgagatatgcagattatctgaatgatggtgacatgctgaaatccttcatgagt
atgaccactaatggtatcaaacaagttattaaggaacatgctgaaaattttgagatgttg
tccttttggctctccaatacataccattttcttaactgtttgaaacaatacagcggggaa
gaggaattcatgaagcaaaatactccacgtcagaatatgaactgtttgaagcattttgat
ctttcagaatacagacaaattcttagtgacttggccattcgtatctatcaccaattcatt
cgtgtaatggagaataacattcagccaatgatagtaccaggtatgcttgaatatgaaagt
ctccaaggaatttctggcatgaaacctacaggattccgtaaacgttcttctagtatagat
gacaccgatacctacacaatgacctccatcctgcaacagctcagctatttttatagcaca
atgtgccagaatggcttggatacagagcttctaaagcaggcagtgaagcagcttttcttt
ctgattggagctgtcacccttaatagtcttttcctccgcaaggacatgtgctcttgtagg
aagggaatgcagataagatgtaatatcagctacttagaagaatggcttaaagaaaagaat
ctgcagagcagttctgccaaggaaactttggaagctctctctcaggcagcctggctcctt
caggtcaaaaaggtcacagaagatgatgccaaggagatatatgaacgctgtacatcccta
tctgctgtgcagatagtaaagatcctcaattcatacactcctatagatgattttgagaaa
agggtgtccccatcgttcgttcgcaaagtccaggctatgctcaataatcgagaggatatt
ccacaactgatgctggataccaaatatctctttcaagtgacatttccttacaccccatct
ccacatgccttagaaattatacaaattcccagcagtttcaaacttggctttctcacaaga
gtataa
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integrated database retrieval system
