Chelonoidis abingdonii (Abingdon island giant tortoise): 116823919
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Entry
116823919 CDS
T07367
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04514
Cell adhesion molecule (CAM) interaction
cabi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116823919 (LRRC4B)
04517 IgSF CAM signaling
116823919 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116823919 (LRRC4B)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
NGL family
116823919 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_At5g56370
LRR_EndoS
LRR_RPS2
DUF7617
Insulin_TMD
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
116823919
NCBI-ProteinID:
XP_032634740
UniProt:
A0A8C0HHJ9
LinkDB
All DBs
Position
11:17606576..17632523
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AA seq
648 aa
AA seq
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MLDMAAPRCCSRRGPPPPRPSRMLWKLVLLLALWLPSLAWAGASPTSCPAACSCSNQASR
VICTRRELVEVPESISINTRYLNLQENNIQLIKTDTFKHLRHLEILQLSKNLIRKIEVGA
FNGLPNLNTLELFDNRLATVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKKLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDMIRPGSF
QGLTSLRKLWLMHAQVSTIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLN
HNPWHCNCDVLWLSWWLKETVPNNTTCCARCHAPANLKGRYIGELDQSHFTCYAPVIVEP
PTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQ
DTGQYTCMVTNSAGNTTASATLNVSAMDPAATGYTYFTTVTVETLETAQEDALPTKKEPG
PTPAVGWDVTYSTTSLTPRSTHSTEKPYTVPITDAAEGGMKDLDDVMKTTKIIIGCFVAI
TFMAAVMLIVFYKLRKQHQFHKHHGPTRTIEIINVEDELPAAAGAPGDSHLALPALEHDH
LNHYAAFKAHYNNNAGALACAKNPLLNSIHEPLLFKSSSKENVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatggctgccccccgttgctgctcccggagggggccgccgcctccccgtccc
tctaggatgctctggaagctggtcctgctgctggccctgtggctgccttcgctggcgtgg
gccggagcttcacctacttcctgcccagccgcctgctcctgcagcaaccaggccagccgg
gtgatctgcacgcgccgggagctggtggaggtgccagagagcatctccatcaacacccgg
tacctcaacctgcaggagaacaacatccagctcatcaagaccgacaccttcaagcacctg
cggcacctggagatcctgcagctgagcaagaacctgatccgcaagatcgaggtgggcgcc
ttcaacggcctgcccaacctcaacacgctggagctcttcgacaaccgcctggccacggtg
cccacccaggcctttgagtacctctccaagctgcgggagctgtggctgcgcaacaacccc
atcgagagcatcccgtcctacgccttcaaccgggtgccctccctgcgccgcctggacctg
ggcgagctcaagaagctggagtacatctccgaggcggccttcgaagggctggtgaacctg
cggtacctgaatctggggatgtgcaacctcaaagacatccccaacctgacggcgctggtg
cggctggaggagctggagctgtcgggtaaccggctggacatgatccgtcccggctccttc
cagggcctcaccagcctgcgcaagctgtggctgatgcacgcccaggtgtccaccatcgag
cgcaacgccttcgatgacctcaagtcactggaggagctgaacctgtcccacaacaacctc
atgtcgctgcctcacgacctcttcacccccttgcaccggctggagcgggttcacctgaac
cacaacccctggcattgcaactgtgacgtcctctggctcagctggtggctgaaggagacg
gtgcccaacaacaccacctgctgcgcccgctgccacgccccggccaacctcaaggggcgt
tatatcggtgagctggaccagagccacttcacctgctatgctccggtcattgttgagccg
cccaccgacctcaacgtgacggaggggatggcggcagagctgaagtgccggacgggcacc
tccatgacctcggtcaactggctgacgcccaatgggacgctgatgacgcacggctcgtac
cgggtgcggatttccgtcttgcacgacggcacgctcaacttcaccaacgtgacggtgcag
gacacggggcagtacacctgcatggtgaccaactcggccggcaacaccacggcctcggcc
accctcaacgtctcggccatggacccggccgccaccggctacacctacttcaccaccgtc
accgtggagacgctggagacggcccaggaggacgcgctgcccaccaagaaggagccgggc
cccacgcccgccgtgggctgggacgtgacctactccaccacctccctgacgccccgctcc
acccactccacggagaagccctacactgtgcccatcaccgacgcggccgagggcggcatg
aaggacctggacgacgtgatgaagaccaccaagatcatcatcggctgcttcgtggccatc
accttcatggcggccgtcatgctgattgtcttctacaagctgcgcaagcagcaccagttc
cacaagcaccacggccccacccgcaccatcgagatcatcaacgtggaggacgagctgccg
gctgcggctggcgcccccggagacagccacctggccctgccggccctggagcatgaccac
ctcaaccactacgcggccttcaaggcccactacaacaacaacgcgggggctctggcgtgc
gccaagaacccgctgctgaactccatccacgaacctctgctgttcaagagcagctcaaag
gagaacgtgcaggagacgcagatctga
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