Chelonoidis abingdonii (Abingdon island giant tortoise): 116823973
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Entry
116823973 CDS
T07367
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116823973
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
116823973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_5
Ig_6
Izumo-Ig
C2-set_2
Ig_C17orf99
VEGFR-1-like_Ig-like
DUF4945
Motif
Other DBs
NCBI-GeneID:
116823973
NCBI-ProteinID:
XP_032634826
LinkDB
All DBs
Position
Unknown
AA seq
1867 aa
AA seq
DB search
MDVGCLGPAVVLAEPLVRGPAAPQLSPEMDLFGGAPRFLAYPRTFTVQSGADAILKCQIA
GDPHPSVIWEKDKSPIALLGRFQVEAEGNVYSLSISQVTPADSGQYVCKAKNAIGETYAA
ATLKVDAGELQQEGDPEDVPPVFLSKPLSWQVCRGEDVMLTCRVSGQPCPVLQWKKDGRQ
LSDLFESSHFSVGKEPEDWHFLKIFSARPPDGGVYVCRAWNRSGEALAAAVLLVDPMARG
LPDCSPLSHFSKQPDQQGDRRLCHGQRTTPWPARHNGEVAPGAPKAKVFAVSEGKHAKFR
CYVTGKPKPEIVWKKDGKVVVPDRRHLVYEDREGYFILKVLYCKAPDQGLYVCTASNTAG
QTLSAVQLQVREPQVRFQLQLEDVEVQECEDAVLECKVPLETIPTAWYLEDKQLQPSHKY
VIEEQGLVRRLTIRDARADDDGIYLCEMKDKGCSIAEVSVRGAIVKRLPRKLDVMEGENA
AFCVETRDAMEGICWSRNGLELRETPCTVLKSFGKTHLLVLVHVTREDAGVISFSVGESQ
TSAQLRIKCAKRVPPSAPVAAEMSTDRSNAALLTWCPGPDVHRTPHSSYVLERQEASTAE
WVQCLTTDLASMVEVFGDSVPAEADYCFRICAVNKYGRSRPVEFPGSVHLVPVACVRRAL
KDVQVQAGQEAQFSLELSASVAGSWFLNGAKLKEEEEGQRYCIKRSGMEHSLVLRNVRLA
ESGAEVKFVSSGVQDSATLQVQAPQVRIAPVPEAQRLRELLAGLPLLLECEVSTPNAAVR
WLKDGEAVPSDDVIALQAEGCARRLFIRSAHPSDSGTYTCDTGEDALSFTVTVTVSEPPV
RIVSSNEDAAHTYLASERVVLACELSRADAPVQWYKDRVEVEEGEHLLLEREGPHRRLVI
PSARPQDTGEFVCDAGGDSIFYNITVTEPPMRIISSNEDAAHTYLASERVVLACELSRAD
ALVQWYKDGVEVEEDEHLLLEREGPHRRLVIPSARPQDTGEFVCDVGSDSVFYNITVTAP
QVRTAPVPEAQRLRELLAGLPLLLECEVSTPNAAVRWLKDGEAVPSDDVVTLQAEGCARR
LFIRSAHPSDSGTYTCDAGEDALSFTVTVSEPPVRIISSNEDAAHTYLASERVVLACELS
HADAPVQWYKDGVEVEEDEHLLLEREGPHRRLVIPLAHPQDTGEFVCDVGSDSIFYNITV
TEPPVRILCPQERSLELRALALQRLELRCELSRADAQVCWFKDGLEVDETENLLLQAEGP
QRWLIVLQAQAEDAGEYICETKDESVSFDIRVSEPPVKILQPWRAPPTLKAIVGETVTLA
CELSRGNVPVQWVKDGTRLEAGGSLILEEEGAHRRLVIPAAGVEHSGKYVCDVTDDTRTF
TVQVCDPPVTILGRSELQTHRRCLATEDLVLEVTLSHAHGEVKWYKDGEKLQDMGRVRLE
EDGARRALVILGMESKDAGEYLCDNHDDSLIFCVAVEEPPVCIVRRKGVREQQCLVAGDD
LVVACEVSQPSAAIRWLRDGQELVASERVRIEDRGALRQLTILRARPSDSGSYVCDAVGD
RMVTTVEVAAPPVCIVNKEEAKMPVEVVEGESVMLVARLSQEQAPVQWLKNKQVLRSGAR
LLLGTQGPLHSLTIKQTELGDSGTFSCDTGDDEVHFTLRVREAPVVFVNKQEKPEKVLVL
EGGSAVLSAIVSKEQAGVSWRGPQQPLAAGQRCELRREGRVHSLVLSNVGKDDAGLYTCL
SRHDQMQFEVSVKELLVKFVRGLSDVQAHMGETVLLWCELCKAKGQVLWLKDGQELEPSG
RWEIKAEGRERSLALSNVGPEDAGEYSCESKDDRTLATVTVQGESRDHGALLQGLDTPGA
QPSAPGP
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggggtgtctgggaccagctgttgtcctggctgaacccctggtgcggggccct
gcagcgccccagctaagtccggagatggacttgttcggaggggccccccggttccttgcc
tacccccgcactttcacagtgcagagtggtgctgatgccatcctgaagtgccagatcgcg
ggtgacccacaccccagcgtcatctgggagaaggacaaatccccgatcgcgctgctgggc
cgcttccaggttgaggctgaggggaacgtgtacagcctgtcgatttcccaggtgacccca
gcggacagcgggcagtatgtctgcaaggccaagaatgccattggggagacctacgctgct
gccacactcaaggtggacgcaggggaactgcagcaggagggagaccctgaggatgtgccc
cccgtctttctgagcaagcctctgtcctggcaggtctgcaggggggaggatgtgatgtta
acctgcagggtctcggggcagccttgccctgtgctgcagtggaagaaggatggccgccag
ttgtcggatctctttgagagcagccatttctctgtggggaaggagccggaagactggcat
ttcctgaagatctttagcgcccggcccccggatggaggggtctatgtgtgcagggcgtgg
aaccgctccggggaggccctggcagcagctgtgctcctggtcgaccccatggctcgtggg
ctgccagactgctcgcccctgagccatttcagtaagcagccggatcagcaaggtgacagg
agactctgccacgggcagcgcaccacaccctggccagcccggcacaatggggaggtggcg
cccggcgcacccaaagccaaggtgtttgctgtgagcgaggggaagcacgccaagttccgc
tgctacgtgacgggcaagccaaagcccgagattgtgtggaagaaggatgggaaggttgtt
gtgccagacaggaggcacctggtctatgaggacagggaaggctacttcatcctgaaagtg
ctgtactgcaaggccccagaccaggggctgtatgtctgcaccgcctccaacacggctggc
cagaccctcagtgctgtgcagctccaagtgagagagccacaggtgcggttccagttgcag
ctggaggatgtggaggtgcaggaatgtgaggatgccgtgctggagtgcaaggtgcccttg
gagaccatccccaccgcctggtacctggaggacaagcagctgcagccaagccacaagtac
gtgattgaggagcagggcctggtgcgacgcctgaccatccgcgatgcccgcgctgacgac
gacggcatctacctctgtgagatgaaggacaaagggtgcagcattgctgaggtctctgtc
agaggggcaatcgtgaagcggctcccgcggaagctggacgtcatggagggggagaatgct
gccttttgtgtggagacccgggacgccatggagggaatctgctggagccggaatgggctg
gagctgcgggagactccatgcactgtgctgaagagcttcggcaaaacccacctgctggtc
ctggtacatgtgacgcgggaggacgctggggtcatctccttcagcgtgggggagtcgcag
acgtcagcccaacttcgcatcaaatgtgcaaagcgtgttcccccgagcgcgcctgtggct
gccgagatgagcacggaccgcagcaacgctgccctcctgacgtggtgcccagggcctgat
gtgcacaggaccccccacagcagctatgtcctggagcggcaggaggccagcacggccgag
tgggtgcagtgccttaccacggacctggccagcatggtggaggtgttcggggatagcgtg
cctgccgaggcagactactgcttccgcatctgtgccgtcaacaagtatgggcggagcagg
cccgtggaattccctggctctgtgcatcttgtccctgtagcctgcgtgcggagagccctg
aaggacgtgcaggtgcaggcgggccaggaagcccagttctccctggagctctcagcctcc
gtggcggggagctggttcctgaacggggcgaagctgaaggaggaagaggaaggccagcgc
tactgcataaagcgcagcgggatggagcactccctggtgctccgcaatgtgcggctggcg
gagagtggggccgaggtcaagtttgtgtccagtggtgtgcaggactctgccactctacag
gtgcaagccccacaggtgcgcatcgccccggtgcccgaggcccagcgcctccgggagctc
ctggcagggctgccgttgctcctggagtgcgaggtctccacgcccaatgccgctgtgcgc
tggcttaaggacggggaggctgtgccctcggacgacgtcatcgccctgcaggcagagggc
tgcgccaggaggctgtttatccgctctgcccacccctcagactccgggacgtacacgtgt
gacacgggcgaggatgcactgagcttcaccgtgactgtgaccgtcagcgagccgcccgtg
aggatcgtcagctctaacgaggatgccgcacacacctacctggcctcggagcgtgtggtg
ctggcgtgcgagctgtcccgtgctgatgccccagtgcagtggtacaaggacagggtggag
gtggaggagggcgagcacctgctcttggagcgtgaggggccccatcgcaggctcgtcatc
ccctcagcccgtccgcaggacacgggggagtttgtgtgtgatgcgggcggtgactccatc
ttctacaacatcacagtgacagagccgcccatgaggatcatcagctctaacgaggatgct
gcacacacctacctggcctcggagcgcgtggtgctggcgtgcgagctgtcccgtgccgac
gccctggtgcagtggtacaaggacggggtggaggtggaggaggacgagcacctgctcctg
gagcgcgaggggccccatcgcaggctcgtcatcccctcggcccgtccacaggacacaggg
gagtttgtgtgtgacgtgggcagcgactccgtcttctacaacatcacggtgacagcccca
caggtgcgcaccgccccggtgcccgaggcccagcgcctccgggagctcctggcagggctg
ccgctgctcctggagtgcgaggtctccacgcccaatgccgctgtgcgctggcttaaggac
ggggaggctgtgccctcggacgacgtcgtcaccctgcaggcagagggctgcgccaggagg
ctgtttatccgctctgcccatccctcagactccgggacgtacacgtgtgacgcgggtgag
gatgcgctgagcttcaccgtgaccgtgagcgagccgcctgtgaggatcatcagctctaac
gaggatgctgcacacacctacctggcctcagagcgcgtggtgctggcgtgcgagctatcc
catgccgacgccccggtgcagtggtacaaggacggggtggaggtggaggaggacgagcac
ctgctcctggagcgcgaggggccccatcgcaggctcgtcatccccttggcccatccgcag
gacacgggggagtttgtgtgtgacgtgggcagcgactccatcttctacaacatcacagtg
acagagcccccagtgaggatcctgtgcccccaggagcgctccctggagttgcgggctctg
gcgctgcagcgcctggagctgaggtgtgagctgtctagagcagacgcccaggtgtgctgg
ttcaaggacgggctggaggtggatgagacagagaacttgctgctgcaggcagaggggccc
cagcgctggctgattgtcctgcaggcccaggctgaggatgccggcgagtacatctgtgag
acaaaggacgagtccgtctcctttgacatcagggtgtcagagcccccggtgaagatcctg
caaccgtggcgagctccccccaccctgaaggctatcgtgggggagacggtgactttggcc
tgcgagctctcgcgcgggaatgtgccggtgcagtgggttaaggatggtaccaggctggaa
gctggcggcagcctgatcctggaggaggagggggcccatcggcggctggtcatccctgca
gctggagtggagcattctgggaagtatgtctgcgatgtgactgatgacaccaggacgttt
actgtccaagtgtgtgaccctcctgtgacgatcctggggcggagtgagctgcagacccac
cgccgctgcctggccacagaggacctggtgctggaggtgacgctctctcatgcgcacgga
gaggtgaagtggtacaaggatggtgagaagttgcaggacatggggcgcgtgcgtctggag
gaagacggggcgcggcgcgcactggtcattctgggcatggagagcaaggatgcgggggag
tatctgtgtgacaaccatgacgacagcctcatcttctgtgttgctgtggaagagccccct
gtgtgcattgtgaggaggaagggggtccgggagcagcagtgtctggtggctggcgatgac
ttggtggtggcctgcgaggtgtctcagcccagcgctgccatccgctggctcagggatggc
caggagctggtggccagcgaacgagtccggattgaggaccggggagctctcaggcagctg
accatcctcagggcccggcccagtgactctggctcctatgtttgtgatgctgttggtgac
cgaatggtgacaaccgtggaggtggcagccccccccgtttgcattgtgaataaggaggag
gccaagatgccagtggaggtcgtggaaggggagagtgtcatgttggttgcccggctctcc
caggaacaggctcctgtccagtggctgaagaacaagcaggtgctgcgttccggggcgcgg
ctcctcctgggcacccaggggcccttgcacagcctcaccatcaagcagacggagctgggg
gacagcggcaccttcagctgtgacactggggacgatgaggtgcacttcaccctgcgagtg
agagaggctccagtggtgtttgtgaacaagcaggagaagccggagaaggtgctggtgctg
gaagggggcagtgccgtgctctcagccatcgtctccaaggagcaggctggagtgagctgg
agggggccccagcagcccctggcagcagggcagcgctgcgagctgcggcgagagggccgg
gtgcacagcctggtgctgagcaacgtgggcaaggacgacgccggcctctacacctgcctc
tcccgccatgaccagatgcagtttgaagtgagcgtgaaagagctgctggtgaaatttgtg
cgaggcttgtcggacgtgcaggcgcacatgggcgagacggtgctgctgtggtgcgagctg
tgcaaagccaaggggcaggtgctgtggctgaaggatgggcaggagctggagcccagtggc
aggtgggagatcaaggcagaggggcgggagcggtccctggcgctgagcaatgtggggcct
gaggatgccggcgagtactcttgtgagtccaaggatgaccggacgctggccaccgtgact
gtgcagggtgagtcacgggaccacggggccctgctccagggacttgatacccctggggcc
cagccttcagccccggggccctga
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