Chelonoidis abingdonii (Abingdon island giant tortoise): 116824001
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Entry
116824001 CDS
T07367
Name
(RefSeq) desmoglein-1-gamma-like
KO
K07599
desmoglein 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116824001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116824001
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Major cadherins
116824001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
RET_CLD1
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116824001
NCBI-ProteinID:
XP_032634885
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MDWLPFRTTAVLFILMVLLDFSIGFHVEVKEWNENGVAQWKTFRRQKREWIKFAAACREG
EDNSRRNPIAKIRSDCEENQPVIYSISGIGIDQPPYGIFVVNSRTGEINITSIVDREVTP
EFVIRCFAKHALTGRDLEQPLDLRVRVLDINDNPPIFSQTVFVGSIEESSMETTLVMKII
AMDADEPNHLNSKIAYKIESQEPAGASMFILNKHTGEVHIANYLDREQYSSYSLVVRASD
RDGAPDGISSLCNCNIKVLDVNDNFPTLSQSSYSATIVENSLSSELLRIQVLDADEQFSD
NWLAEFFFIAGNEENCFEFITDPATNEGILRVIKPLNYEYMQSYPLSFGVRNKAAFHHSV
ATQYQVIGIPLTIKVKNEIEPPCFSPSSMSFFLPRSLSVAAMSNYMVGVYTATDEETGKT
ASNVRYRIGHDPGAWFRVNPTTGEIFLNKIIDRESSYVVNGLYRAKLLAITRDAPAKTST
GTIVLVVDDSNYKCPTLSTEMRKVCMSSPTVIITAKDLDGDTHSPPFTFTIANQPARGSW
SIRPIDGYSAELRTQNIEFFIYDVYVHLMDNQGRRCQRPQRIPLQACLCDSLLICTSGAT
ETLFPEDVTDDVTIDGGLVTIGGSIVTSADTGIGYTDVYGHTGPYIGVRQEGTTTLGGAA
IALMFLGGLIFVLFPILMAMSDCCGYGARPVGGVGAGFEPVPECTEGAIHSWGIEGAHPE
DMTIKGISAPQPVATAGDFVESSVSDIYTNTYGGGGAVVTSGLEETKGLGTAVGYGTTSG
YGAATAYGTMGKKESIGGTLREYREGGVNMAFLDSYFSEKAFAYADEDEGRPANDCLLIY
DHEGIGTPVGSIGCCSFIGEDIDDTYLDTLGPKFKTLAEICLGKVIEPIPGVSATFPNIE
SDLKLPPPGTTIIVNESSSVPPPVGSTTIVTENTYTSGSTLQPARPVPDPLLHGNVMVTE
TYTSGSTFQPPTLSVDPLRASNVVVTERVLAPASASDLRGILDIPDLTDGANVVVTERVI
APGSRLPPSLSIPDLADASNVVVTERVIRPASGLPGNLTIPSELSNAQNVVVTERVVSGP
GMGGMSSIGGLSSMTGQLLSADTHLSQTVGSVSPGTSRRRVTKYSTIQYANQ
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggattggctccccttcagaacaactgctgttctattcattttaatggtgctcttggat
ttcagcattggatttcatgtagaggtgaaagaatggaatgaaaatggcgtggcacaatgg
aaaaccttcagaagacaaaaacgagaatggattaaatttgctgcagcttgtagggaagga
gaggataattcaaggaggaatccaattgccaaaattcgatcagattgcgaagaaaatcaa
ccagttatatacagcatctctggaatagggattgatcagccaccttatgggatctttgtt
gttaattcaagaactggagaaattaatataacatcaatagttgatcgagaggtgacccca
gaatttgtaattcgctgctttgctaaacatgcacttactggtagagatttagaacagcct
cttgaccttcgagtcagagttctggacataaatgacaatccgccaatcttttcacaaaca
gtgtttgtcggatctattgaagagagctctatggagactactctggtgatgaaaataatt
gccatggatgcagatgaaccaaatcacttgaattccaaaattgcctacaagatagagagt
caggaacctgctggtgcatcaatgtttattctaaataaacatactggagaagttcacata
gcaaattatcttgacagagagcaatatagcagctactctcttgttgtgagagcctcagac
cgcgatggagctccagatggaatctcctccctttgtaattgtaatattaaagttcttgat
gtcaacgataatttcccaactctttcacagagttcatattcagcaactattgtggaaaat
tcactcagttcagaactgctacggatacaagttctggatgctgatgaacagttttcggac
aactggttggcagaatttttctttatagctggcaatgaggagaactgctttgaattcata
acagatccagcaactaatgagggtattctgagggttattaagccgctgaattatgaatac
atgcaaagttatccactgagttttggtgttagaaataaagctgcattccaccattcagtt
gctactcagtatcaagttataggaataccgctaacaataaaagtaaaaaatgagatagaa
ccaccatgctttagtccatcttcaatgagcttttttctgccaagaagcttatcagtagct
gccatgtctaattacatggttggagtatatacagccactgatgaggaaactggaaaaact
gcatcaaatgtcagatatcggattggacacgatccaggtgcctggttcagagtcaacccc
acaactggtgaaatctttttgaacaaaattattgatcgggagtcatcctatgtagtcaat
gggttatacagagcaaagttgctggctattacaagagatgctcctgcaaaaacttccact
ggtaccattgtgcttgtagttgacgattccaattataagtgtccaactcttagtactgaa
atgagaaaagtatgtatgagttctcccacagttattatcacagcaaaagatctggatggt
gatacacatagtcctccctttacatttaccatagctaatcagcctgcaagaggttcatgg
agtattagaccaatagatggttactctgcagaactgagaactcaaaatatcgagtttttc
atttatgacgtctatgtccatctgatggataatcaaggcagaagatgtcaacgaccacag
agaattcctttgcaagcctgtctttgtgatagcctcctgatttgtactagtggtgctaca
gaaacattatttcccgaagacgttacagatgatgtgacgattgatggtggtctggtcact
attggtggtagtattgttacatctgctgatactgggattggttatactgatgtttatgga
catactggtccttatataggagtccggcaggagggaacgactacacttggtggtgctgct
attgctctgatgtttcttggaggcttaatatttgtgttgtttccaattttgatggcaatg
agtgactgttgtggttatggagcgagacctgtaggtggcgttggggctggatttgagcct
gtacctgaatgcacagaaggagcaattcattcatggggaatagaaggagcacatcctgaa
gacatgactatcaaaggcatcagtgcaccacaaccagttgccactgcaggtgactttgtt
gaatcctctgtttcagacatttatacaaatacatatggaggaggaggagcagtggtaact
tcaggacttgaagaaactaaagggctcggaacagctgtaggttatggaacaactagtggc
tatggggcagctactgcctatggaacaatggggaaaaaagagtcaattggagggacatta
agagaatatagagaaggaggagtaaatatggctttcttagacagctacttctcggagaaa
gcatttgcctatgcagatgaagacgaaggccgaccagcaaatgattgtctactaatatat
gatcatgaaggaataggtacacctgttggttctattggctgctgcagttttattggagaa
gatattgatgacacctatttagacacgttaggaccaaaatttaagaccttggcagaaatc
tgtttaggcaaagtcatcgaacccattccaggtgttagtgctacctttcccaatattgaa
agtgatctaaagctgccaccacctggaactacgatcatcgttaatgaatcttcatctgtg
cctccccctgttggtagtacaacaattgttaccgaaaacacttacacatctggttctacc
ctacagcctgcaaggcctgtacctgatcctttgctccatggtaatgtaatggtgactgag
acttacacatccggctcaacttttcaaccacccacactaagtgtcgatcctcttcgtgca
tcaaatgttgttgtaacagaaagggtgcttgctcctgcctctgcctctgatttgcgcggc
attctagatattcctgatctaacagatggggcaaatgttgtagtcacagaaagggtaatt
gcacctggttcaaggctacccccttctttgagtatccctgatcttgcagatgcatcaaat
gtagtggtgacagaacgagtgattagacctgcctctggtctgccaggcaatttaactatt
ccttctgagctatcaaatgcacaaaatgtagttgttacagagagagtagtatctgggcct
ggcatggggggcatgagcagcatcgggggcctgagcagcatgactggtcaattgcttagc
gctgacactcatcttagccagacagttggctccgtctcccctggtacatctcgaagaagg
gtaacaaaatacagcacaatacagtatgctaatcagtaa
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