Chelonoidis abingdonii (Abingdon island giant tortoise): 116824208
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Entry
116824208 CDS
T07367
Symbol
MED13
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116824208 (MED13)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
116824208 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
116824208
NCBI-ProteinID:
XP_074930147
LinkDB
All DBs
Position
20:complement(19104953..19191879)
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AA seq
2176 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPTLLILFIMISQKRKMAYGRMDCLTNVALCFX
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PITSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGVSH
CSTTCLGVHQMPVSTRDPVMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFSSDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNCLCVEETADKVASWDFVEATQ
RTNCNCSRHKNFKPRSSGQQGQAPPVGQQQQAAPKHKTNEKQEKGDKPQKRPLTPFHHRA
SISDDVAMEADSASQRLVITAPDSQVRFSNIRTNNDVAKTPQMHGSEMANSPQPPPLSPH
PCDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKTMEDRIDPLSQPFPPQFPEIIEPIMY
VGTAMNLEEDDANTTWKFYKVPKKKDVEFLPPQLPSDKFRDDPVGPTGQDNITSVTELMV
QCRKPLKVSDELVQQYQSKNQYLVAVVSEADQEPEIDPYAFVDGDVEFLFPDNKKDRQNS
EREAGRKHKAEDGTSNVTVLSHEGEDAMSLFSPSVKQDAQRIAAHARTASTSLFHETDLV
VSYTDLDNLFNSDEDELTPGSKRTVNGSDDKSNCKESKAGNLDPLSCISTADLHKMYPTP
PSLEQHIMGFSPMNMNNKEYGNMDATLGGTILEGNSSSVGIQFRIEVDEGFCSPKPSEIK
DYSYVYKPENSQAFVGCSTFAPLKTLPSQCLPPVKLPEDCIYRQSWTVGKLELLPPGPTM
PFIKEGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRT
PRTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLIL
SESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNN
SGLFLEDELDILGRNTECGKEAEKRFEALRATSVERGLKEPEKLPDELMLLLQDQCTNLF
SPFGAADQDPVARFGAVNNLVRVEERDCCNDCSLALEHGRQFMDNMSGGKVDEALVKSTC
LHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRIVRSWGVQGPLTWQQFHKMAG
RGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVVCPEN
EALLNGAKSFFRDLTAVYEACRLGQHRPICKLLSDGIMRVGSTASKKLSEKSVTDWFSQA
ANANNEAFSKLKLYAQVCRYDLGPYLASQPLDNSLLSQPNLVPLTSQSASTQPLVAGNTG
NSNTPSSSTAAATSSTMTVTSNSAMSSAATTTNSTLTTTAPSSSSINVGSGISTNKPSFP
PFSGMNSTTSASLPTQAPTAPNGQTGGQQQQPALQAAGISGETSSAPPQPHPEVSESTMD
RDKVGVPTDGDSHAVSYPPAIVVYIIDPFTYEKKDEHSNSSSVWTLGLLRCFLEMVQILP
PNIRSTVSVQIVPCQYLLQPVKNEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGF
GPGLAIETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSH
DQRWLLASCTDLYGELLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSSLPW
RVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAME
PQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASSTYTT
ENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGEMG
KGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPEWFWSACPQAQNQCPLFLKA
SLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPV
HFVVLNQLYNFIMNML
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaaccttttc
tgtctggctgacttgactgggattaaatggaaacgatacgtatggcagggtccaacatct
gccccaattctctttccggtaacggaggaggatcccattttgagcagtttcagtcgctgt
ctgaaagctgacgtactgagtgtttggcggcgcgatcagagacctggacgcagagagttg
tggatattttggtggggcgatgacccaactttactgatcttattcatcatgatctctcag
aagaggaagatggcatatgggagaatggactgtcttacgaatgtcgcactctgcttcaaa
gcagttcacaacctgctggagaggtgtctaatgaaccggaattttgtgcgcattgggaag
tggtttgtgaagccttatgagaaagatgaaaaacctataaataaaagtgagcacttgtct
tgctctttcacctttttcttgcatggggacagcaatgtttgtaccagtgtggaaatcaac
cagcaccaacctgtatatcttctgagtgaagaacatcttacccttgcccagcagtctaac
agccctttccaagttatcctaagtccatttggattaaatggcacactcacaggacagtca
ttcaaactctcagattcatctacaaaaaagctgattggtgaatggaaacaattctatcct
atcacatctaacctgaaggagggttctgaggaaaaacaagaagagatggattgggaagat
gactctctggctgctgtggaagtccttgtagctggtgtgcgaatggtctacccagcatgc
tttgttctagttcctcagacagacattcctgctcccagcactgtgggggtttctcactgt
tcaactacttgcttgggtgtccaccaaatgcctgtttccacaagggatcctgtcatgtct
tctgtaactttgactccgcctacgtccccagaggaagttcagacagttgatgctcagtca
gcccagaagtgggtgaaattttcttctgtttctgatggatttagctctgacagtactagc
caccatggtggcaaaatccctagaaaactagccaatcaggtggtggatcgagtttggcaa
gaatgcaatatgaacagagcacagaacaagagaaagtattctgctacgtcaaattgctta
tgtgttgaagagacagctgacaaagtagcatcctgggacttcgttgaagccacacagagg
acaaattgcaattgctcaaggcacaaaaattttaaaccaagaagttcgggtcagcagggg
caggcaccacctgtaggccaacaacaacaagcagctccgaagcacaagacaaatgagaag
caagagaagggggataagccacaaaaacgccctttgactccttttcaccatcgtgcatct
attagtgacgatgttgccatggaggcagattcagcaagtcagaggcttgtgatcacagca
ccagacagtcaagtgagattttcaaatatcagaactaataatgatgtagcaaagactcct
cagatgcatggcagtgaaatggcaaattcacctcaaccaccaccacttagtcctcaccca
tgtgatgtcgttgatgaaggggtaactaaaactccttctactcctcagagccagcatttc
tatcagatgccaacaccagatcccttggttcccacaaaaacaatggaagacaggatagac
ccattgtctcagccttttccacctcaattcccagaaattatagaacctataatgtatgtt
ggtactgcaatgaatttggaggaagatgatgctaacaccacttggaagttttacaaagtt
ccaaagaaaaaggatgtggaattcttaccaccacaacttccaagtgataaattcagagat
gatccagtaggaccaactggacaggacaacataacatcagttacagaattaatggtgcag
tgcaggaagcctttaaaggtttcagatgaactggtgcagcaatatcagagtaaaaaccaa
tacctagtagcagtagtgtctgaagctgaccaagaacctgaaattgatccttatgcattt
gttgatggtgacgtggaattcctttttcctgataacaaaaaggataggcaaaacagtgaa
agagaagctgggagaaaacacaaggctgaagatgggacctctaatgttacagttttatcc
catgaaggagaagacgctatgtcactgtttagtccttctgtcaagcaagatgcacaacgc
attgctgctcacgctcgcactgcatcaactagcctgtttcatgaaacagacctggtagtc
tcttatactgaccttgacaatctcttcaactctgatgaagatgaactaacacctggttct
aaaagaacagtgaatggctcagatgacaaatccaattgcaaagagtcaaaagcaggaaat
ttggacccattgtcgtgcataagtactgcagatcttcataaaatgtatccaacaccacca
tcgttggaacaacatattatggggttttcaccaatgaatatgaacaataaggaatatggg
aatatggacgctacacttggaggaactatacttgaagggaatagctctagtgtaggcatt
cagtttagaattgaagtagatgagggattctgcagtccaaaaccttctgaaatcaaggat
tattcctacgtctataagcctgagaatagtcaggcttttgtggggtgttccacgtttgcc
ccactaaagactctccccagccaatgtctccctcctgtcaagctgccagaggactgcatt
taccgtcagagttggactgttggaaaactggagttacttcctccaggacccaccatgcca
ttcatcaaagagggtgatggaagcactatggatcaagagtatggccctgcctacacacca
caaactcatactccatttgggatgccgcccagtagtgcacctcctagcaatagtggagca
ggaattctcccatctccttccactcctcggttcccaactcctagaacaccaaggacacct
cgtacccctcgtggagctggtggacctgccagtgctcaaggttcagtcaaatatgaaaat
tctgatttgtattcaccagcgtccacaccatcaacatgtagaccactaaattcagttgaa
cctgcaactgtaccatccatccctgaggcacacagtctttatgtgaatctcatcctttca
gagtcagtaatgaatctgttcaaagactgtaactttgatagctgctgcatctgtgtctgc
aacatgaacatcaaaggtgctgatgttggagtttacattccagatccaacacaagaggct
caatataggtgtacctgtggcttcagtgctgtcatgaatagaaagtttggcaacaactct
ggattgtttcttgaagatgaattggatatcctcgggcgtaatacagagtgtggcaaagaa
gcagagaaacgttttgaagctcttagagctacttctgttgagcgaggactgaaagaacct
gagaaattgcctgatgagttgatgctgttgctgcaagatcagtgcaccaacttgttttca
ccatttggagcagcagatcaagatcctgtagccagatttggtgcagttaacaacctggta
cgtgtagaagaaagggattgttgcaatgactgctccttagcattagaacatgggcgccag
ttcatggacaatatgtcaggaggaaaagttgatgaagcacttgtgaaaagtacttgcttg
catcactggtcaaaaagaaatgttgtggatgtgagcatgcagtgttcacaggacatcctt
cgcatgcttctgtcactccagccagttcttcaggatgctattcagaaaaagcgaatagtc
cgatcttggggtgtgcagggccccctcacatggcagcagtttcacaaaatggctggccga
ggctcttatggaactgatgagtccccagaaccactgccaattccaacatttttgctggga
tacgattatgattttctggtgctgtctccatttgccttgccatactgggagaggctgatg
ttggaaccttatggatctcaaagagacattgcttatgttgtggtgtgtcctgagaatgag
gccctactgaatggagcaaaaagcttctttagagatctgactgcagtatatgaggcttgc
agactcggtcagcatagacctatctgtaaactgctctctgatgggatcatgagagttgga
tccactgcttcaaagaaactttctgaaaagtcggtcacagactggttttctcaggcagct
aatgccaacaacgaagcattttccaaactcaagctctatgctcaagtttgcagatatgac
ctgggtccttatcttgcttctcagccattggacaattctttactttctcagccaaatcta
gttcccctcacaagtcagtcagcatccactcagccactggttgcaggtaacactggaaat
tccaacactccatcgtccagtactgcagctgctaccagtagtaccatgacggtgacttca
aacagtgccatgtcttctgcagctactacaactaattcaactttgaccactactgccccc
tcatcttcttccatcaatgtaggcagtgggatatcaacaaacaaaccttcatttccacct
tttagtggcatgaacagtactacttctgcctccctgcctacacaggctccaacagccccg
aatggacagacagggggacagcagcaacaacccgctcttcaagcagctgggatatctggg
gaaacttcatctgcccctccacagccacacccagaagtctctgaaagcactatggatcgt
gataaagttggagtccctacagatggagattcacatgctgtctcctatccacctgcaatt
gtagtttatataattgatccttttacgtatgaaaagaaagatgagcatagcaactcgtcc
agtgtgtggacccttgggcttcttcgttgctttctagagatggttcagattcttcctcct
aatatcaggagtacagtttctgtgcagattgtcccttgtcagtacctgttacaacctgtg
aaaaatgaagataggcaaatctacacccaacacttaaaatctctggcattttcagcattt
acacagtgtcggagaccacttccaacttcaaccaatgtcaaaacattgactggttttggc
ccaggtttagcaatagaaactgctcttaagagccctgatagaccagagtgtattcgactc
tatacacccccttttatattggctcctgtaaaggacaagcaaacagagttaggagaaact
tttggagaggctggacagaaatataatgtgctttttgtgggttattgtttatctcatgat
caaagatggcttcttgcatcatgcacagatctctatggagaactgctagaaacttgcata
attaatatcgatgtaccaaacagagctcgtaggaaaaaaggttctgcccgcagacttggt
ctccaaaaactctgggaatggtgcttgggacttgtgcagatgagttcattgccctggaga
gttgtaataggccgtctaggaaggataggtcatggagaattaaaagattggagttgtttg
ctgagtcgccgaaacctccagtccctcagcaagagactgaaagatatgtgtaggatgtgt
ggtatatctgctgcagattctcccagcattctcagtgcttgcttggtggcaatggaacca
caagggtcttttgttattatgccagattcggtgtcaacaggttctgtatttggacgcagc
actactttaaatatgcagacatctcagctgaataccccacaggacacatcatgcactcat
atacttgtgttccctacgtctgcctctgtgcaagtagcatcgtcgacctataccactgaa
aatttggacttggccttcaatacaaacaatgatggagcagatggaatgggcatctttgat
ttgttagacactggagatgaccttgatcctgatattattaatatccttcctgcatcccct
actggatcccctgtacattcaccaggatcccattacccccatggaggtgaaatgggcaag
ggtcaaggtacagatagattgctttcaacagaatctcatgatgaagtaacaaatatcctg
caacaaccattggcccttggttactttgtatcaactgccaaagccggtccattgcctgag
tggttttggtcagcatgtcctcaagcacaaaatcagtgtcccctgtttcttaaggcctct
ttgcacctccatgtgccttcagtgcaatcagacgagctactccacagtaaacactcccac
ccacttgactctaatcaaacttctgatgttctcaggtttgttttggaacagtacaatgca
ctctcctggctaacctgtgatcccgcaacccaggacagacggtcatgtctcccagttcat
tttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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