Chelonoidis abingdonii (Abingdon island giant tortoise): 116824233
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Entry
116824233 CDS
T07367
Symbol
SYNRG
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116824233 (SYNRG)
Membrane trafficking [BR:
cabi04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
116824233 (SYNRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
116824233
NCBI-ProteinID:
XP_032635249
Ensembl:
ENSCABG00000015959
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MFPVAGGIGPPGGMIPIQQPGFPMVSVMQSNMPGMMGMNYGSQMSPGPMNMQGGMPLGAM
QATGMSFMGQASFLGMRPAAPQYTPDMQKQFAEEQQKRFEHQQKFLEEERKRRQFEEQKQ
KLKLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTPASHPKKPDHPMPSHSTVSV
SQPSAFLDDEEFSEFIQGSVETPPLVPQSSFQSYHPTTQARQLLSEKALVKPLPSVQIPV
SSILHDTIGQVPYFSTSTSSHKTHKTGHSLEDSLLIYDLSASGQEQTKLKTSEIEHKASA
ASQVHPSVTVNNGNAVGGLVSGTTAAEVYKASQQNIAVEECGVGVFPSQDPIQQMMPPWI
YNENLAPDLYKKILETTMTPTGINTAKLYPILMSSGLPRETLGQIWALTNRTTPGKLTKE
ELYTVLAMIAVTQRGVPAVSPDVLNQFPTAPVPTLSGYPISLPATVNQQPMRPSGPPVSM
PLNIGQAVIGVNITPPVGGAAAQVSSGFMPSYPTNQVVKPEDDDFQDFQDASKSGSLDES
FSDFQGEGPGSSKATSSQHWSSVPSLLIPLPGTKTPSSTDKYAVFKGIAVEKPSESAAMF
ADYGDKYSAFRELEQPSESKYLGDSFAEFKSAGTDDDFTDFKTADSISPLDPPTKERTFP
ASFPSLPAQLKQQTQAKTSLNLADLDLFSSTGENKQLSFPAAFSSSKSTSFPAAPPPTSA
AAPPPAPSKSSSLADDFGEFNLLGGLSNCVSVGGQDDFADFMAFNNSSGFSEQKMDDKYK
AVKQEANPVPPAGSSLSAMKSGQNSGAAAPTKYDIFKQLSLEGSGTGVEELKDSTPSVKS
DDDFSDFHSNKFSSVCSNMDKSLVDKVAAFKHAKEDSASVKSLDLPSIGGSSVGKEDSED
ALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPAADIDDLKCAPFGNYNSGSAVSS
LASYDWSDTEDIHQSRKLSSFVLSSGSGVSSATSVLQKKETLFGSSENITMTTVSKVTTF
STDDVLQDVKFAAFANFKDPGPRSSCQSDDEIEGFGEFSRPLSEAKESATVDASPEVDLA
TDGILPEMAKECMDDFGEFQSEKPKISKFDFLVATSQGKIKSSEEMIKSELATFDLSVQG
SHKRSFSLGDREISRSSPSPALEQPFRDRSNTLSEKPALPVIRDKYKDLTGEVEESERYA
YEWQRCLESALQVIKKANDTLNGISSSSVCTEVIQSAQGMEYLLGVVEVYRVTKRVELGI
KATAVCSEKLQQLLKDIDKVWNNLISFMSLAALTPDENSLDFSSCMLRPGIKNAQDLACG
VCLLNVDSRSKKEEKPVEEHPSKAFNSETDHFKLAYGGHQYHASCANFWINCVEPKPPGL
ILPDLL
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgtagcaggtggtatcggcccaccaggaggtatgattcctattcaacagcca
ggatttccgatggtatctgtcatgcaatctaatatgccaggcatgatgggaatgaattac
ggctctcagatgtctcctggaccgatgaacatgcagggtggcatgccccttggggctatg
caagcaactggaatgtcttttatgggacaggcttctttcttaggaatgcgcccagcagct
ccacaatacacccccgacatgcagaaacaatttgcagaagagcaacaaaaaaggtttgaa
caccagcaaaaattcttagaagaagagagaaaacgacgccaatttgaagagcagaaacaa
aagctgaaactcttgagcagtgtgaaaccaaagacaggtgagaagagcagagatgatgct
ttggaagctattaagggaaacttagatgggttttcaagagatgctaaaatgcatcccact
ccagcatcacatccaaaaaaaccagatcaccctatgccatcacattctactgtatctgtc
tcccaaccctctgcttttcttgatgatgaagaatttagtgaatttatacaagggtctgtt
gaaaccccaccattggtgcctcagtcctcttttcagtcttaccatcctaccacccaggct
cggcaactgctttcagaaaaggctctagtcaaacctctgccttcagtccagattccagta
tcttctatcctgcatgataccattgggcaggttccttatttctctacctctacatcttcg
cacaaaacccataaaacaggccattccttggaggactcgctcttaatttatgatttaagt
gcatctggacaggagcaaaccaaacttaaaacatctgaaattgagcataaagcctcagct
gcaagccaagttcatcccagtgtaaccgtgaataacgggaatgctgtaggtggacttgta
agtggtaccaccgctgcagaggtgtacaaggcttcacaacaaaacatagcagttgaagag
tgtggtgttggagtattcccttcccaagatccaatccagcaaatgatgccaccttggatt
tacaatgaaaacttggctccagatttgtataagaaaattttagaaaccactatgactcct
actggaataaatactgctaaactctatcccattctgatgtcatctggacttcccagggag
acccttggacaaatatgggccttgaccaatcgtaccacacctggaaaacttactaaagaa
gagctttatactgtcctggctatgatagcagtaactcagagaggagtacctgcagtgagt
cctgatgttttaaaccaatttccaactgctcctgtccctactttaagtggatatccaatt
tcattgcctgccacagtgaatcaacagcctatgaggccctctggaccaccagtctccatg
cctcttaatattggacaggcagtcataggagtgaacataactccaccagtgggtggagct
gcagcacaggtttctagtggtttcatgccatcttaccccacaaaccaggtagttaaacca
gaagatgatgacttccaggattttcaggatgcttcaaagtctggctcactcgacgaatct
ttctctgatttccaaggggagggacctggatcctccaaagcaaccagttctcagcactgg
agcagtgttccttctttgctgattccactccctggcactaaaacaccttcctcaacggat
aaatatgctgtgtttaaaggaattgcagttgaaaagccttctgaaagtgcagctatgttt
gcagattatggagacaaatacagtgctttccgagagttagaacaaccatcagagagtaaa
tacttaggagatagcttcgcagaattcaaatctgcaggaaccgatgatgatttcacagat
tttaaaaccgctgacagcatctcgccactagacccacctacaaaagagagaactttccct
gcatccttcccctctctacctgcacagctaaaacaacaaacacaagcaaaaacctctctg
aatctggcagacctagatctcttttcctccactggagagaacaaacaactttcatttcca
gctgcatttagttcatcaaaatcaacctctttccctgcagcaccacctccaacatctgct
gctgcccctccaccagcacccagtaaaagctcgagcttggctgatgactttggagaattc
aatcttttggggggattgtctaattgtgtatcagttgggggacaagatgactttgcagat
tttatggctttcaataatagcagtggcttttctgaacaaaaaatggatgacaaatacaaa
gctgttaagcaagaggctaatcctgttcctccagctggctcctctctcagtgcaatgaaa
agtgggcagaattctggcgctgctgctcccaccaaatatgatatctttaaacagctttct
ctggagggctctggaacaggtgttgaggaactgaaagacagcaccccttcagtgaaaagt
gatgatgacttttccgacttccactctaacaagttttcttccgtgtgtagtaacatggat
aaatccctggtagacaaagtggcagctttcaagcatgccaaggaagactctgcttctgtc
aagtctctggatctcccctccatcgggggcagcagtgtcggcaaggaggattctgaagat
gcgctctctgttcagtttgacatgaaactggccgatgtgggaggagatcttaagcatgtc
atgtctgatagctctttggatttgccaacagttagtggccagcatccgccagcagcagat
atagatgacttaaaatgtgctccctttggaaactataacagtggctccgcagtaagcagc
cttgcaagctatgactggtctgacacagaagacattcatcagagcaggaagctctcttcc
tttgtcctttcttcaggaagtggagtctcttcagctacttcagttcttcagaagaaggag
actttgtttggcagttcagaaaacattaccatgacaacagtttccaaagtgacaaccttt
tctactgatgatgttctacaggatgtcaaatttgcagccttcgcaaactttaaagatcct
ggtcccaggtccagctgtcaaagtgatgatgagattgaaggcttcggagagttctcaaga
cctttgtcagaagcgaaggagtcagcaacagttgacgcaagcccagaggttgacttagct
accgatggtatcttacctgaaatggcaaaagaatgcatggatgacttcggagaattccaa
agcgaaaagccaaaaatcagcaaatttgacttcttggtggcaacttctcaaggcaagata
aaatctagtgaagaaatgatcaagagtgagcttgctacctttgacctctctgttcaaggg
tctcacaaaaggagcttcagtctgggtgacagagaaataagccgttcctctccttcacca
gctttggagcaaccatttagagatcgctcaaatactttgagtgagaagcctgctttgcct
gtcatcagagacaaatataaagatctaactggggaggtagaggaaagcgagaggtatgca
tatgagtggcagagatgtttggaaagtgccctacaagtcattaagaaggcaaatgatacc
ctaaatggaatcagtagttcatctgtttgcactgaagtaatccagtcagcacaaggcatg
gaatatttattaggggttgttgaggtctacagagtaacaaaacgagttgaactgggtatc
aaggccaccgcagtgtgtagtgagaaactccaacagttgctaaaggacatcgataaagta
tggaacaacctaataagcttcatgtcacttgcagctttaacgccagatgaaaactcattg
gatttctcttcttgtatgctgcgtccagggattaaaaatgcccaagacctcgcctgtggg
gtgtgcctcttgaatgtggattctagaagtaaaaaagaagagaaacctgtggaagagcat
cctagcaaagcttttaattcagaaacagatcatttcaaactggcttatggagggcaccag
taccatgcaagctgtgcaaacttctggatcaactgtgtggagccgaaacctccaggcctc
attttgccagacctgctttga
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integrated database retrieval system
