Chelonoidis abingdonii (Abingdon island giant tortoise): 116824237
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Entry
116824237 CDS
T07367
Symbol
SRSF1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03040
Spliceosome
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116824237 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116824237 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cabi03041
]
116824237 (SRSF1)
Spliceosome [BR:
cabi03041
]
Common components
Common spliceosomal components
SR proteins
116824237 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116824237
NCBI-ProteinID:
XP_032635264
Ensembl:
ENSCABG00000017158
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSVVVAEAVVEATAEVAVIPQEEAEDLHATLPV
TADLVLVHK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagggggcgtgatccgcggcccagccggtaacaacgactgccgcatctacgtg
gggaacctgccgcccgacatccgcaccaaggacatcgaggacgtgttctacaagtacggg
gccatccgcgacatcgacctcaagaaccgccgcggcgggccgcccttcgccttcgtggag
ttcgaggaccccagggatgcggaggatgcggtgtacggaagggatgggtacgattacgat
ggatatcgtctgagggtggagtttccccgaagtggcagaggcaccggcagaggaggtgga
ggtggtggaggtggtggagcccccaggggcaggtatggccccccgtcccggcggtctgag
taccgagtgatagtttctggactgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggaactggtgtcgtg
gagtttgtacggaaagaagatatgacctacgcagtgcgaaaactggataacactaaattt
agatctcatgagggagaaactgcctacatccgtgttaaagttgatggcccaagaagtcca
agctatggaagatctcggtcacgcagcgtagtcgtagcagaagccgtagtcgaagcaaca
gcagaagtcgcagttattccccaagaagaagcagaggatctccacgctactctccccgtc
acagcagatctcgttctcgtacataaatga
DBGET
integrated database retrieval system
