Chelonoidis abingdonii (Abingdon island giant tortoise): 116825037
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Entry
116825037 CDS
T07367
Symbol
SRF
Name
(RefSeq) LOW QUALITY PROTEIN: serum response factor
KO
K04378
serum response factor
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116825037 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116825037 (SRF)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
116825037 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
116825037
NCBI-ProteinID:
XP_032636617
Ensembl:
ENSCABG00000009617
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSWCSASLPLKTRVLGAVIPPDVIGQQQALMLEEASRGPGRGADALRSWPALAPAWPGRA
ASSRPGGGAARRERRSGAGAWQRAGLAGPAVERERTRRRPGRGRAALQAARRDSSRGRGR
VAAAATPGLKRSLADVELGGVYGGPCVAAAAAGYGGVSGAVSGAKPGKKTRGRVKIKMEF
IDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVARETGHVYTFATRKLQPMITSET
GKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDSLKPAFTVT
NLPGTTSAIQTVPTTSTSMQVSSGPSYPITNYLAPVSASVSPNTVTSANGTVLKTTGTSA
VASGGLMQLPSGFTLMPGASLPPGTPTIPLAQLQPHSLALSSQQGQAVAGTAGQLQQAQQ
TVFRFPATAGGQIVSLTGGTVTQQVPVQAIQVHQAPQQTSPSSDSSTDLAQTSSSGTVTL
PATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGGLTVLNAFSQASSAMQVSHGQVQD
QGAVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQSSSSSNLTELQVVNLDTSHGAKSD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtgctcagccagcctccctctgaaaacaagggtgttgggtgcggtgattccc
cctgatgttattgggcagcagcaggctctgatgctggaggaggccagccggggcccgggg
cggggcgcggacgcgctgcgcagctggcccgcgctggctccggcatggcctggccgggcc
gcctcgagccggccggggggcggcgccgcgcggcgcgaacggcggagcggggccggggcc
tggcaacgggcggggctggcggggccggctgtcgagcgggagcggacgcggcggcggccg
ggccggggccgggccgctctacaggcagcgaggcgcgactcgagtcgcggacgaggacga
gtggcggcagcggcgacgcctggcctgaagcggagcctggcggacgtggagctgggtggt
gtgtacggtgggccgtgcgtggcggcggcggccgcgggctacggcggggtgagcggggcc
gtgagcggggccaagcccggcaagaagacccggggccgggtcaagatcaagatggaattt
atcgacaacaagctgcggcgctacaccacgttcagcaagcggaaaaccggcatcatgaag
aaggcctatgagctctccaccctgacgggcactcaggtgctgctgctggttgccagagag
acgggccatgtgtacacgtttgccacgcggaagctgcagcccatgatcaccagcgagacg
gggaaggcgctgatccagacatgcctgaactccccggactcacccccccggtccgacccc
accaccgaccagcgcatgagtgccacgggcttcgaggagaccgacctcacctaccaggtc
tcggagtccgacagcagcggcgagacgaaggactcgctgaagcctgcgttcacagttacc
aacttgccagggacgacgtcggccatccagaccgtgcccaccacctccacgtcaatgcag
gtcagcagcggcccctcctacccgatcaccaactacctagcgcccgtctctgccagcgtc
agccccaacaccgtcaccagcgccaacgggactgtgctcaaaaccacaggcaccagcgcc
gtggcctccggagggctcatgcagctccccagcggcttcactctcatgccaggcgcttcg
cttcctcctgggacccctaccattcctcttgcccagttacagccgcactcgctggcgctt
tccagccagcagggccaggcggtcgcgggcacagctggacagctgcagcaggcacagcag
acagtcttccgcttccccgccacagctggagggcagattgtgtctctgacaggcggcacc
gtgacgcagcaggttcccgtgcaggccatccaggtacatcaggccccacagcaaacgtct
ccatccagcgacagcagcactgacctcgcccagacctcttccagtggaacagtgacgctg
ccagcgacgatcatgacttcgtctgtgccaaccacagtgggaggtcacatgatgtacccc
agccctcacgccgtgatgtatgcgcccacctcaggcctggcggacgggggtttgaccgtc
ctcaatgccttctcccaggcgtcctcggcaatgcaggtctcccacggacaggtccaggat
cagggtgctgtcccccaggtgttcctgacggccccatcgggcactgttcagattccggtc
tcagccgtccagcttcaccagatggctgtcattggccagcagtccagcagcagcagcaac
ttgaccgagctgcaggtggtgaacttggacacgtcccatggcgccaagagtgactga
DBGET
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