Chelonoidis abingdonii (Abingdon island giant tortoise): 116825908
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Entry
116825908 CDS
T07367
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116825908 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116825908 (SMARCD1)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116825908 (SMARCD1)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116825908 (SMARCD1)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116825908 (SMARCD1)
PBAF complex
116825908 (SMARCD1)
GBAF(ncBAF) complex
116825908 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
116825908
NCBI-ProteinID:
XP_032638200
Ensembl:
ENSCABG00000011252
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MAARAGFQSVAPSGGGGAGALGPGTPGPPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSR
MTPQGPSMGPPGYGGSPSVRPGIAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKM
ADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISN
TFNPAKSDAEDGEGTVASWELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDKDL
YGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIH
TQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPP
EPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETI
ETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQ
EAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggttttcagtcggtggctccgagcggcggcgggggggccggagca
ctggggccgggcaccccggggccccccgtccgcatgggcccggctcccggccaaggcctc
taccgctcccccctgccgggcgccgcctacccgcgccctggtatgttgccaggcagccgc
atgacacctcagggaccctccatgggtcccccaggatatggtgggagtccctcagtccga
cctggaatagcccaatctggtatggatcagtcccgcaagaggccagctcctcagcaaatc
cagcaggtccagcagcaagcggtccagaatcgtaatcacaacgctaagaaaaagaaaatg
gctgacaaaattctacctcagaggattcgtgaactggtaccagagtctcaggcctacatg
gatctgttggcatttgaaaggaaactggatcagacgatcatgaggaaacgtctggatatc
caggaggccttgaaacggcccattaagcaaaagcgaaagctgcgcatttttatctccaac
accttcaatccagccaagtcggacgcagaagatggtgaagggactgttgcctcgtgggag
ctccgggtggaagggcggctgcttgaggacgctgctctgtccaaatatgatgccactaaa
cagaaaaggaaattctcatccttcttcaagtctctggtgatcgagctggacaaggacctg
tatggcccagacaatcacctggtggagtggcacagaactgctactacccaggagacagat
ggcttccaggtgaagaggcctggggatgtgaatgtgcgctgtaccgtcctcctgatgctg
gactatcagccaccacagttcaaactggaccctcgcctggctcgtctcttggggattcat
acccagacccgcccagtgatcatccaggcactgtggcagtacatcaagacccacaagcta
caagatccccatgagcgggagtatgtcatctgtgacaaatatctccagcagatatttgag
tctcagcggatgaagttctctgagattcctcaaaggctgcacgctttgctcatgccccca
gaaccaatcatcattaaccatgtgatcagtgttgacccaaacgaccagaaaaaaactgcc
tgctatgacatcgatgtggaagtggatgatactcttaaaactcagatgaattctttcttg
ctgtccacagccagccagcaggaaatcgctgccctggataacaagatccatgagacaata
gaaaccattaatcagctgaagacacaacgtgagttcatgctgagttttgcccgtgacccc
caaggcttcatcaatgactggctccagtcacagtgccgagatctaaagaccatgactgat
gttgttgggaatccagaagaggagcgtagagctgaattctatttccagccctgggctcag
gaagctgtgtgcagatacttctactccaaggtgcagcagagacggcaggagctggagcag
gcactgggaatccgcaacacataa
DBGET
integrated database retrieval system
