Chelonoidis abingdonii (Abingdon island giant tortoise): 116826067
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Entry
116826067 CDS
T07367
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116826067 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116826067 (CSTF1)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
116826067 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
PROPPIN
VPS8_N
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
Frtz
Beta-prop_HPS5
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
116826067
NCBI-ProteinID:
XP_032638445
Ensembl:
ENSCABG00000012278
UniProt:
A0A8C0H076
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MAARTGVRRMSGRRVPSACDRRPLPRGLSNVGSPAPEPRPLRLPFLEAEAPARHSLLTMY
RTKVSLKDRQQLYKLIISQLLYDGYINIANGLINEIKPQSVCAPSEQLLHLIKLGMENDD
SAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL
IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH
PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR
LYDINTFQCFVSCNPQDQHTDAICSVNYNTSANMYVTGSKDGCIKLWDGVSNRCITTFEK
AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQVHRTQAVFN
HTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRAR
FWYRRSTTD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaggacaggtgtgaggaggatgtcaggccgtcgtgttccctcagcgtgtgat
agacgtccgcttccacggggcctgagtaacgtgggctcccccgctcctgagccacggcca
ctgcggctgcctttcctggaggctgaggcacccgcaaggcattccttgctcacaatgtat
agaacaaaagtaagcttgaaagatcgtcaacaactttacaaactgattattagtcaattg
ctgtatgatggatacataaacattgccaatggcctgataaatgagataaaaccacaatca
gtctgcgcaccctctgaacaactgctgcatctgattaaactaggaatggagaatgatgac
agcgcagttcagtatgcaattggacgctccgatacagtagctccaggaacagggattgac
ttagaatttgatgcagatgtccagactatgtcccccgaggcttctgaatatgagacttgt
tacgtcacatctcataaaggaccatgtcgcgtagctacatatagcagagatgggcagtta
atagctacaggatctgctgacgcctcaataaaaattctcgatacagagagaatgttggca
aaaagtgctatgcccatcgaggtcatgatgaatgagacagcacaacagaatatggaaaat
catcctgttattcggactctgtatgatcatgtggatgaggttacatgtttagctttccat
ccaacagaacagatcctggcatctggttcaagggactatacacttaaattgtttgactat
tcgaaaccttctgctaaaagagccttcaagtatatccaggaagcagaaatgttacgctcc
atctcttttcatccttctggcgacttcatacttgttggtacccagcaccctaccttacgg
ctttatgatatcaacacgttccagtgttttgtgtcttgcaatcctcaagatcaacacacc
gatgctatatgttcagtaaactataatacaagtgctaacatgtatgtgacaggaagcaaa
gatggatgcatcaaattatgggatggagtttcaaatcgatgtatcactacttttgagaaa
gcacatgatggagctgaagtctgttctgccatcttttccaaaaattcaaagtacatcctg
tcaagtggaaaagattctgtagctaaactatgggagatatccacaggtcgaacactggtc
aaatatacaggagctggtttgagtggacgacaagtacacagaacacaggcagtctttaac
cacacagaggactatgtgttgcttcctgatgaaaggaccataagtctctgctgctgggac
tcaagaacggcagaacggcgaaatcttctgtcattggggcataacagcattgtccggtgt
attgttcattctcctaccaatcctggtttcatgacatgcagtgatgactacagagctcga
ttttggtaccgaaggtcaaccacagactaa
DBGET
integrated database retrieval system
