Chelonoidis abingdonii (Abingdon island giant tortoise): 116826248
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Entry
116826248 CDS
T07367
Symbol
PCDH7
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116826248 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cabi01009
]
116826248 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116826248 (PCDH7)
Protein phosphatases and associated proteins [BR:
cabi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116826248 (PCDH7)
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116826248 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
DUF3239
LYRIC
TMEM154
KIAA1549
Motif
Other DBs
NCBI-GeneID:
116826248
NCBI-ProteinID:
XP_032638778
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MRKMRTLFGFVHCCCCCFLLLLPPPLWVSLAAAKQLLRYRLAEEGPADIRIGNVASDLGI
VTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVI
GPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGI
ERYELLQEPGGDGGRRGGGGSASAAESALYPGGSKRRQEPDGAARSSVFELQVADTPDGE
KQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSVYEA
DLAENSSPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR
EEVNQLRFAVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGMASVAED
VVVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAPLD
YEAIRDYNVVIVAVDSGSPSLSSNNSLLVRVADTNDNPPVFGQAVLEVSFPENNSPGERV
ATVAATDADSGRNAEIFYSLEPSPLSSEAPGGIFSIDPDSGDVLVQAVLDREQRDTYEFQ
VTARDKGVPALQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDADR
GRNAELSLSIQPGEQDQAAGIFSIENDTGTIYSTVSFDREQQTSYTFKVKAVDGGEPPRS
ATATVSLFVMDENDNPPAVTFPSNSSYTVLPPSSNLRTVVATVLATDADTGLNADLNFSI
IGGNPFKLFEIDPASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLHVFVNESL
SNATVVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVVVMARY
CRSKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEASKPNGQR
YDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQE
LPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQVDTVQTTQPPGHIEESCKMNVCARK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgcggactctctttggctttgtgcattgctgctgctgctgcttcttgctc
ctgctacctcctccactctgggtcagcctggccgcggccaagcagctgctgaggtaccgg
ctggccgaggaaggacctgccgacatccgcataggcaacgtggcttcggacctgggcatc
gtaacgggctctggagaggtgacattcagcctggagtcgggctccgactacctgaagatc
gataacatgaccggggagctgagcaccactgagcggcgcatagaccgcgagaagctgccg
cagtgccagatgatcttcgatgagaacgagtgcttcctggacttcgaggtctcggtaatc
ggcccttcgcagagctgggtggacctcttcgaaggccgggtcatcatcctggacatcaac
gacaacacccccaccttcccctcgcctgtcctcacccttaccgtggaggagaaccggccc
gtagggaccctctatctgctccccactgccaccgacagagacttcggtcgcaacggcatc
gagcgctacgagctgctgcaggagcccggcggcgacgggggcagacgcggaggagggggg
tcggcttctgcagctgagagcgccctctaccccggtggcagtaagaggaggcaggagccg
gacggggcggcccgcagcagcgtgttcgagctgcaggtggccgacacccctgacggggag
aagcagccgcagctgattgtcaagggggcgctggaccgagagcagagggactcctatgaa
ctgagcctgagggtgcgggacggcggcgacccggcccgctcctcccaggccatcctgagg
gtgctgatcaccgacgtgaacgacaacagcccccgctttgagaagagcgtctacgaggcg
gatctggcagagaacagcagccccgggacccccatcctgcagctgcgggccgccgacctg
gacgtgggggtgaacgggcagatcgagtacgtcttcggggccgccaccgagtcggtgcgg
cgcctgctgcggctggacgagacctcgggctggctcagcgtcttgcaccgcatcgaccgg
gaggaggtgaaccagctccgcttcgccgtcatggcccgggaccggggccagccgcccaag
actgacaaggccacggtggtgctgaacatccgcgacgagaatgacaacgtgcccaccatc
gacatccgtaagatcggccgcatcccgctgcgggacgggatggccagcgtggccgaggac
gtggtggtggacacccccatcgccctggtgcaggtgtccgaccgcgaccagggcgagaac
ggagtggtgacctgcacggtggtaggggacgtgcccttccagctcaagccggccagcgag
ggcgagggggagcctcagaacaagcgcaagtacttcctgcacacctcagccccgctcgac
tacgaggccatccgtgactacaacgtggtgatcgtggccgtggactcgggcagccccagc
ctgtccagcaacaactcgctgctggtgcgggtggcggacaccaacgacaaccccccggtg
ttcggccaggccgtgctggaggtctccttcccggagaacaactcgcctggggagagggtg
gccacggtggcggccacggacgcggacagcggcaggaacgccgagatcttctactcgctg
gagccctcgcccctctcctcggaggcgcctggcggcatcttcagcatcgacccggactcc
ggggacgtgctggtgcaggctgtgctggaccgcgagcagcgcgacacctacgagttccaa
gtcacggcccgggacaagggggtgccggccctgcagggctccaccactgtggtggtgcgg
gtggccgaccgcaacgacaacgagccgcgcttcatgcaggacgtgttcaccttctacgtg
aaggagaacctgcagcccaacagccccgtgggcatggtgacagtgatggacgccgaccgg
ggccgcaacgccgagctcagcctctccatccagcccggggagcaggaccaggccgccggc
atcttctccatcgagaacgacaccggcaccatctactccaccgtctccttcgaccgggag
cagcagaccagctacaccttcaaggtcaaggcggtggacggaggggagccgccccgctcg
gccaccgccaccgtttccctcttcgtgatggacgagaacgacaacccgcccgccgtcact
ttccccagcaacagctcctacaccgtgctgcccccgtccagcaacctgcgcactgtggtg
gccaccgtgctggccaccgacgcggacacgggcctcaacgccgacctcaacttcagcatc
atcgggggcaaccctttcaagctcttcgagatcgacccggccagcggcgtggtgtcgctg
gtgggcaagctggcccccaagcactatggcctgcaccgcctggtggtgcaggtgaacgac
agcggccagccgccccagtccaccaccgccttgctccacgtcttcgtcaacgagagcctt
tccaacgccaccgtggtggagagccaggtggcccgcagcctgcacacgcccctggcccag
gacatcgccggcgaccccagctacgagctgagcaagcagaggctcagcatcgtcatcggg
gtggtggccggcatcatgacggtgatcctgctcatcctggtggtggtcatggcccggtac
tgccgctccaagggaaagcacggctacgaggcgggcaagaaagaccatgaggacttcttc
accccgcagcagcacgacaaggccaagaagcccaagaaggacaagaaaggcaagaagggc
aagcagcccctctacagcagcatcgtcaccgtggaggcctccaagcccaacgggcagcgc
tacgacagcgtcaacgagaagctctccgacagccccagcatgggccggtaccgctcggtc
aacggcggcccaggcagcccggacctggccaggcattacaaatccagctcgccgctgccc
actgtccagcttcacccgcagtcccccaccgccgggaaaaagcaccaggccgttcaggaa
ctgcccccggccaatactttcgtgggggcaggagacaacatctccattggatcggaccac
tgctccgagtacagctgtcaggccagcagcaagtacagcaagcaggtggatacagtgcag
actacgcagccccctggccacattgaggaatcgtgtaaaatgaatgtatgtgctcgtaag
tga
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integrated database retrieval system
