Chelonoidis abingdonii (Abingdon island giant tortoise): 116826296
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Entry
116826296 CDS
T07367
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04010
MAPK signaling pathway
cabi04210
Apoptosis
cabi04218
Cellular senescence
cabi04620
Toll-like receptor signaling pathway
cabi04621
NOD-like receptor signaling pathway
cabi04622
RIG-I-like receptor signaling pathway
cabi04623
Cytosolic DNA-sensing pathway
cabi04625
C-type lectin receptor signaling pathway
cabi04920
Adipocytokine signaling pathway
cabi05132
Salmonella infection
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116826296 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116826296 (NFKB1)
04218 Cellular senescence
116826296 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116826296 (NFKB1)
04621 NOD-like receptor signaling pathway
116826296 (NFKB1)
04622 RIG-I-like receptor signaling pathway
116826296 (NFKB1)
04623 Cytosolic DNA-sensing pathway
116826296 (NFKB1)
04625 C-type lectin receptor signaling pathway
116826296 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
116826296 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116826296 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
116826296 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116826296 (NFKB1)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116826296 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
116826296
NCBI-ProteinID:
XP_032638829
Ensembl:
ENSCABG00000019431
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MAEEDAYIMGVSDHQMFAMDQFMGVNALFNSTGFITSDLPLRTDGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVKIFNYVGPAKVIVQLVTNGKNVHLHAHSLVGK
YCEEGVCTVNAGPKDMVVGFPNLGILHVTKKKVFETLEARMTDACKKGYNPGLLVHPELN
YIQAEGGGERQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLDPVIS
DAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGVWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDK
EEVQRKRQKLMPNFSDGYGGGSGAGGGGGGMYGGGGSGAGSGYGYPSYGYSAYGGMPFHP
GTTKSSSGMKHGISNDTGEQDGESCNKHDDKPDMKHNTTVEITERRESRVCSGDNKEEDV
TLSCTAGVTEADCRLQDDLFLEKAMQLAKRHANALFDYAVTGDVKMLLAVQRHLTAVQDE
NGDNVLHLAIIHLHSELVRNLLEVVLDFNLDDIINMRNDLYQAPLHLAVITKQAEVVEDL
LRAGADVSLLDRHGNSILHLAAKEGDDKILNILLKHEKTSPMINYSNGEGLNVIHMAVMA
NSMPCLRQMIAAGADINAQEQKSGRTALHLAVEQENISLAGCLLLEGDANVDSTTYDGTT
PLHIAAGRGSTKLTALLKAAGADPHIENFEPLFDLEDVRDKDSEDEGIVPGTTPLDMASS
WEVFDILNGKPYESKLASDDLLLQGDMKKLNEDSKQQLYKLLEVPDPNKNWSTLAQKLGL
GILSNAFRLSPTPAKTLLDNYEVSGGTVKELVDALRLMDYTEAIEIIQKVLSIPLNQSSN
EDNVLKAPPSSPSAFATKEETGELYNVKLQDNESMCDSGVETSFRRLSFTYSESLNSKSS
ITLSKMALGYEQEGSVQGKM
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagatgcctatatcatgggagtatctgatcatcaaatgtttgcaatggat
cagttcatgggagtgaatgcactatttaatagtacaggtttcattacctcagatttacca
ctacgaacagatggaccatatcttcaaattatagaacagcctaaacagagggggtttcgt
ttcagatatgtgtgtgaagggccatcacatggtggacttccaggtgcttctagcgaaaag
aacaaaaaatcataccctcaggtcaaaatcttcaattatgttgggcctgcaaaagtaatt
gttcagttagtcactaatggaaaaaacgtccacctgcatgcccacagcttggtgggtaaa
tattgtgaggaaggagtatgcacagttaatgcaggacctaaggatatggtagtagggttt
ccaaacctagggatacttcatgtcactaagaagaaagtgtttgaaactctggaagcacga
atgacagatgcctgtaaaaaaggatacaatcctgggctcctagtgcatcctgaactcaac
tatattcaagcagaaggtggtggagagagacaactaacagagagggaaagagaaatcatc
cgtcaggcagccgttcagcagactaaagagatggacctcagcgtggtgcgactcatgttc
acagccttcctccccgacagcactggcagcttcacaagaaggcttgatcctgtcatatca
gatgcaatatatgacagcaaagcccccaatgcatccaatttaaagattgtaagaatggac
agaacagcaggatgtgtgacaggaggagaggagatttaccttctttgtgacaaggttcag
aaagatgatattcaaattcgtttttatgaagaggatgaaaatggtggcgtatgggaaggc
tttggagatttttctcctacagatgtacataggcagtttgctattgtattcaaaacccca
aagtacagagatgtcaatatcacaaaaccagcatctgtttttgtccaactgcggcggaaa
tctgatctggaaacaagtgagccaaagccgtttctgtactacccagaaatcaaagataaa
gaagaagttcagaggaagcgacagaagcttatgcctaatttttctgatggttacggtgga
ggcagtggtgctggaggtggaggaggtggaatgtatggaggcggaggaagtggtgctggc
tcagggtatggttacccctcctatgggtattctgcgtatggaggcatgcctttccaccca
ggcaccacaaagtctagttctggaatgaaacatggaatttcaaatgatacgggtgaacag
gatggggaaagctgcaataagcacgatgacaaaccagatatgaaacataacacgacagtg
gaaatcacagagaggagggagtccagagtttgtagtggtgataataaggaggaggatgtt
actttgtcatgtacagctggagtaactgaagcagattgtaggttacaggatgatctattc
ctggagaaggcaatgcagcttgctaaacgtcatgccaatgctctttttgactacgctgta
actggtgatgtgaagatgctactagctgttcaacgacatcttactgccgtccaggatgaa
aatggtgacaatgtccttcacttagcaattatccaccttcattctgagctggtgagaaac
ctcttagaagtggtgctggattttaatttggatgacatcatcaatatgagaaatgacctt
tatcaggcaccattgcatttggcagttatcacaaagcaggcagaagtggtagaggacttg
ctgagggctggagctgatgtcagccttctggatcgacatggcaattctatcttgcatcta
gctgccaaagaaggagatgataagattttaaatatactccttaagcatgagaagacatct
ccaatgatcaactattcaaatggggaaggtctcaatgtgattcacatggcagtgatggca
aatagcatgccttgtctcagacagatgattgctgctggagctgacatcaatgctcaggaa
caaaagtccgggcgaactgcattgcatctggctgtcgaacaagagaacatctctttggca
ggctgccttctccttgagggtgatgcaaatgttgacagtactacatacgatgggacaact
ccacttcacatagcagctggaagggggtctacaaaactgacagctcttctcaaagcagca
ggtgcagatcctcacattgagaactttgagccattgtttgacctagaagacgtgagagac
aaagacagtgaagacgaaggaatcgtacctggaacgacacctttggatatggcctccagt
tgggaggtatttgacatattaaatggcaaaccttatgaatcaaagttggcttctgatgac
ttactgttgcaaggagatatgaaaaaattgaatgaagactccaagcagcagctttacaag
ttactggaagtaccagatccaaacaaaaactggtctacactggcacaaaaattgggtctg
ggaatacttagtaatgccttcaggttgagtcctaccccagccaaaactctgctggataac
tatgaggtttctggtggtacagtgaaggagttggttgatgccttgagactaatggattac
acagaagcaattgaaatcattcagaaggtgctctccatcccattaaaccagtctagcaat
gaggataatgttctgaaggctccgccatcgtcaccatctgccttcgccaccaaagaagag
acgggtgaactttataatgtaaaattgcaagacaatgaaagcatgtgcgatagcggcgtg
gagacctccttccgcagacttagcttcacttactctgagtcccttaacagcaagtcatcg
ataacacttagcaaaatggccctgggatatgaacaagaaggctcagttcaaggcaaaatg
taa
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integrated database retrieval system
