Chelonoidis abingdonii (Abingdon island giant tortoise): 116826831
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Entry
116826831 CDS
T07367
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116826831 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116826831 (TAF5L)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116826831 (TAF5L)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116826831 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
116826831 (TAF5L)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116826831 (TAF5L)
STAGA complex
116826831 (TAF5L)
TFTC complex
116826831 (TAF5L)
SAGA complex
116826831 (TAF5L)
SLIK complex
116826831 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_EIPR1
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Beta-prop_IP5PC_F
eIF2A
Ge1_WD40
Nbas_N
Motif
Other DBs
NCBI-GeneID:
116826831
NCBI-ProteinID:
XP_032639734
Ensembl:
ENSCABG00000013175
UniProt:
A0A8C0ISK4
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLAVQSESGCANVVSA
APCLAEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFMQNASQKDIIEQLQTTLTIQDILSNFKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLSLHIHLDVQPAKRMDYQLYASGSSSRNESNGLETTDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDIVDEEEEDDNNVGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPWSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSIRVWDIR
NTYCNAPADGSSNELVGVYTGQMNSVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcagaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcgcagtccaatctgaatctggttgtgccaacgtagtgtctgca
gctccctgcctggcagagccacagcaatatgaagtgcagtttggacgattacgcagtttt
ctcacagattcagattcccagcacagccatgaagtgatgcctcttctgtatccccttttc
gtctacctccatcttaacatggtccaaaatggcctaaagagcacagtggacagtttctac
agtcgcttccatgggatgttcatgcagaatgccagccagaaggatatcattgagcagttg
cagactaccctgactattcaagacatcctgtccaacttcaagctccgggcatttctggac
aacaagtatgttatccgccttcaagaagacagctacaactaccttctccgctacctccaa
agtgacaacaacaatgctctttgcaaggttctcagcttgcacattcacctggatgtgcag
cctgccaagaggatggactaccagctatatgccagtggcagctcctcacgcaacgagagc
aatggcttggaaacaacagacatgcctgcttccatactgcagaatgaggcagcactggat
ttactgcaggacagcattaaacgagtcaaggacgggcctccttcactaaccaccatttgt
ttctatgccttttataacacagagcagttgctgaacacagcagagatctcaccggatagc
aagctgcttgctgctgggtttgataattcttgtgtaaagctgtggagcttgcgatccagg
aagttaaaatctgagccccatcttgtagacgtgtccagaatccgcctggcttgtgacatc
gtggatgaggaggaggaagatgacaacaatgtaggcacagaaatgaagatactgagagga
cattgtggaccggtgtatagcacaaggttcctatcggacagttcgggactcttatcttgt
tctgaggacatgtctatcagatactgggaccttggaagttttacaaacactgtgttgtac
caagggcatgcctaccctgtctgggatttggacataagtccttggagcctgtactttgcc
agtggttcccatgaccgcacagcaagactctggtcattcgatcggacatacccactgcga
atatacgcgggccacttagcagatgtggactgtgtaaaatttcaccccaattccaactac
ttggctacaggatccacagacaaaactgtgcgcttatggagtactcaacaggggaactct
gtgcgcctcttcacaggtcaccgtggccctgtgctagcacttgcattttctcccaatggt
aagtatctggcttcagcaggagaagaccagcggttaaagctgtgggacttggcatctggc
actctttacaaagaactgagggggcacacggacaatataaccagccttacttttagcccc
gacagtagtttgattgcctctgcatcgatggacaattctattcgggtttgggacattcgg
aacacatactgcaatgcccctgcagatggttcttccaatgaactggttggtgtatatacc
ggacagatgaatagtgtactgagtgtacaatttatggcctgtaaccttcttctggtgact
ggaattgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
