Chelonoidis abingdonii (Abingdon island giant tortoise): 116826853
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Entry
116826853 CDS
T07367
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116826853 (FXR1)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116826853 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
116826853 (FXR1)
mRNA cycle factors
Stress granule specific factors
116826853 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
116826853
NCBI-ProteinID:
XP_032639765
Ensembl:
ENSCABG00000019346
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLRDACASENAHKDFKKAVGACRIFYHTETMQLIILSASESTVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDTGTFRIYGESADAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKENIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPPSTRGPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDERESRHQRDSRRRSGGRGRSISG
GRGRGGSRGGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPGNSSGAMVTV
ADYISRAESQSRQRNLPRETLAKNKNEMAKDVIEEHGPSEKAINGPANASGDEPSKPQPS
PEEEKSSTIQEEENNQEEAVLNGVS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgaccgtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgtccatgaggattcactcacagttgtatttgaaaacaattggcaaccagagcgc
caggttccttttaacgaagtcagattaccacctccacctgatatcaagaaagaaatagga
gaaggagatgaagtggaggtttactcaagagcaaatgaccaagaaccttgtggctggtgg
ctggcaaaagttcgaatgatgaaaggagagttttatgtcattgagtatgctgcttgtgat
gccacatacaacgaaatagtcacatttgaacgacttcggcctgtgaatcaaaataaaact
gtcaagaagaacacattctttaagtgcacagtggatgttcctgaagatctgagagatgcg
tgcgctagtgaaaatgcacataaggattttaaaaaagctgtaggagcttgtcgaattttc
taccatactgaaactatgcagttgataatactgtctgccagcgaatcaacagtgaagaga
gtaaatatattgagtgacatgcatttgcgcagcattcgtaccaagctaatgctcatgtca
agaaatgaagaagccacaaaacacttagaatgcacaaaacaacttgcagcagcatttcat
gaggaatttgttgtaagagaagatttaatgggacttgcaataggaacacatggtagtaac
atacagcaagcgaggaaagttccaggagtaactgcaattgagcttgaggaagatactggt
actttcaggatctatggagagagtgctgatgcagtaaaaaaagctagaagttacttggaa
tttgtggaagattttattcaggttcccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagattgtagacaagtctggagttgtccgggtgagaattgaaggg
gacaatgaaaacaagctgcccagggaagatggaatggtcccattcgtatttgttggcact
aaagaaaacattggaaatgtccaagttcttttagaataccatattgcctatctgaaggaa
gtagaacagctaaggatggagaggctccagattgatgaacaactgcgtcagattggtatg
ggtttcagaccaccttccaccagaggtcctgaaaaggaaaaggggtacactactgatgag
agtactctctcctcagtacaagggtccaggtcatatagtggaagagggagaggtcgcaga
ggccccaattatacgtctggttatggtacaaactctgagctgtctaatccctctgaaacg
gaatccgagagaaaagatgaactgagcgattggtcactggcaggagaagatgagcgggag
agccgacatcagcgggacagcagaagacgttctggaggaagagggcgtagtatttctggg
ggtcgtggacgtggtggatcacgtggtgggaagtcatccattagctctgtgcttaaagat
ccggacagcaacccttacagcttacttgataacacagagtcagaccagactgtggacact
gatgccagtgaatctcatcacagtactaaccgtcgtaggcggtcacgcaggcgaaggact
gatgaagatgctgttctgatggatggaatgacggaatctgacactgcttctgttaatgag
aatggcttagatgatagtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccaggtaactcgagtggagctatggtcacagta
gctgattacatatcacgagctgaatctcagagtagacaaagaaacctcccaagggaaaca
ttggccaaaaacaagaatgaaatggcaaaagatgtgattgaagaacatggcccttcagaa
aaagcaataaatggccctgctaatgcttctggggatgaaccttctaagccacagcctagt
cctgaagaagagaagtcaagtactatacaagaagaagaaaataatcaggaagaagcagtg
cttaatggtgtttcataa
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integrated database retrieval system
