Chelonoidis abingdonii (Abingdon island giant tortoise): 116826862
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Entry
116826862 CDS
T07367
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116826862 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cabi01002
]
116826862 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cabi00536
]
116826862 (SHH)
Peptidases and inhibitors [BR:
cabi01002
]
Cysteine peptidases
Family C46: hedgehog family
116826862 (SHH)
Glycosaminoglycan binding proteins [BR:
cabi00536
]
Heparan sulfate / Heparin
Morphogens
116826862 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
116826862
NCBI-ProteinID:
XP_032639775
Ensembl:
ENSCABG00000013644
UniProt:
A0A8C0H632
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MDEMLLLTRILLVGFISVLLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKRVRDLSPGDRVLAADAQGRLLYSD
FLAFLDREHGAPKLFYVIETRQPRARLLLTAAHLLFVAPPHNHSQPEPARSRALFASRVR
PGQRVYVLGEGGRRLLPAAVHSVSLREEASGAYAPLTAQGTILINRVLASCYAVIEEHSW
AHWAFAPFRLAHALLAVLSPSAGLPEAEPAPPGLHWYSRLLYRLGSWVLDSDSLHPLGMA
VQAS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctgttggtgggcttcatcagcgttcttttg
gtctcctctgggctgacttgtggaccaggcaggggtattggaaaaaggagacaccccaaa
aaactgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatctcaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacactggagctgacagactg
atgactcagagatgcaaagacaagctgaacgccctggcgatctcagtgatgaaccagtgg
cccggcgtgaagctgagggtgaccgaggggtgggatgaagatggacaccactccgaggag
tcgctgcattacgagggccgagccgtggacatcaccacctcggacagggaccgcagcaag
tacggcatgctggctcggctggcggtggaggctggcttcgactgggtctactatgagtcc
aaggcccacatccactgctccgtcaaagcggagaactcggtggccgccaagtcgggcggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcacgaagcgcgtgcgggac
ctgagccccggggaccgcgtgctggcggcggacgcgcagggccggctgctctacagcgac
ttcctggctttcctggaccgcgagcacggcgcccccaagctcttctacgtgatcgagacg
cggcagccgcgggcccgcctgctgctcaccgccgcccacctgctcttcgtggcgcccccg
cacaaccactcccagcccgagcccgcccgcagccgcgccctcttcgccagccgcgtgcgg
ccgggccagcgggtctacgtgctgggcgagggcggccggcggctgctgcccgccgcggtg
cacagcgtctccctgcgggaggaggcctcgggggcctacgccccgctcacggcccagggc
accatcctcatcaaccgggtgctggcttcctgctacgccgtcatcgaggagcacagctgg
gcgcactgggccttcgcccccttccgcctggcccacgccctgctggccgtgctctccccc
agcgccggcctgcccgaggcggagcccgccccgccgggcctccactggtactcgcgcctc
ctctatcgcctcggcagctgggtgctggacagtgactccctgcacccgctgggcatggcc
gtgcaggccagctga
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