Chelonoidis abingdonii (Abingdon island giant tortoise): 116826868
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Entry
116826868 CDS
T07367
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116826868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabi03009
]
116826868
Ribosome biogenesis [BR:
cabi03009
]
Eukaryotic type
Pre-60S particles
RNases
116826868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
zf-C2HC_3
Motif
Other DBs
NCBI-GeneID:
116826868
NCBI-ProteinID:
XP_032639787
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MLRSAGYFSGFSCPFDGASGAGCPRPHCQYRHEAGRSGQQQPLSDVPAMELGKSIQELER
IKKAIESVKTEVAEGQKKLSQYNLQDEIPKNSLTSKTNDVKGNKTSPDGDGLHSSLTKDK
CLVVPVSKYSSKGCHLVSSKYVIDHSCPATDLEYDPLLNYSAGLLSSSIMKEQENDTQQF
KRVKMPLADFPMESPKMSPCGNRHGSPKKRSRSYSPIKLEIKLQESDDDDVLVIDAPPLT
VTKKPRISRNFKNWNREENKQVAITCAENLQNGNIGEDPLKYIEEKQSEVTVTLQKDDNA
DISNPDKSVKTPPKTQSAYLPDVKINALKSLNNLCEQRKPFTVSEENNISSISHIKAQMQ
NETLKKEDPKSEISVKTSVEELSTNKDKNTPSCKREVQTSLYFEASSKHKTVLTAQEACK
KLPVNIGKIQFIHENGENEVLGNAPIHPSTPLNLGEKICLDEDLLTKNRSGEGSSNTMNT
TVQESEIIILDSSSEEDMECSEEDTELSESDDPIEECRRIFNEFVESEAQKQEIAKQALG
AHVEVDTLDTKTNMVSGQKKRIAHTAKFDVQTNKEILVPFKAPLPQQSCPTRILQAQQQA
VQITAAVKSGQAFVAATSGQKKTVPVLSTTQIQNVGPMVCLNLLEVQPVATSSGQLNVFL
QGNAVTAMPCRPSNISVKRIAPMPIKVSSRRRLSIIPESGSKVPHDTRQRYVNFFVEEYL
KVCRTVNEAFEKALVEEKAIYDRCGSKNMYLNIAVNTLKKLRDQGSLSPNGQSCGSRCTN
TTGSRKLEEKNDFSGIVLYRILKDYVLTEEQLHENGYPQPNPEKPGSAILGNGITKTAVS
DASKRVCCRCGEIYTVTASGKHIRKEECNYHSGRVLKQKVPGGLETRYSCCEGVVGSPGC
QVAKLHVHDGRKENLEGFVKTFIKLTPADGNHGVFALDCEMCYTTQGLELTRVTVVDSSL
QVAYETLVKPDNEIIDYNTRFSGVTEEDLKNTSSSIRDVQAILLNLFSADTILIGHSLEN
DLFALKLIHNTVVDTAVVFPHRLGLPHKRALRNLMADYLRRIIQDDVGGHDSSEDAAACM
ELMLWKVKEDTKGRKW
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctccgcgggttacttcagtggcttttcctgccctttcgatggcgcctcgggc
gctggctgcccgcggcctcactgccagtataggcacgaggcgggacggagcgggcagcag
cagccgctgagtgacgtccctgccatggagctgggtaaaagtatacaagaattggaaaga
atcaaaaaagcaattgagtcagtcaagactgaagttgcagaagggcagaagaaactctcg
cagtataatttgcaagatgaaatacctaaaaactctctgacatctaaaacaaatgatgtt
aaaggaaataaaacttccccagatggtgatggtctgcatagctctcttacaaaagacaaa
tgtcttgtagttccagtctctaagtactctagcaaaggctgtcatttggtatccagtaaa
tatgtcattgaccatagttgtccagcaactgaccttgaatatgatccactgctaaattat
tctgcaggcctactcagctcttcgataatgaaagagcaggaaaatgacacacagcaattt
aagcgggtgaaaatgcctcttgctgattttcccatggagtctccaaaaatgtctccatgt
ggaaatcggcatggatccccaaagaagagatcaagaagctattcaccaatcaagcttgaa
ataaagctccaagaatctgatgatgatgatgttctggttattgatgctccaccattgact
gtcactaagaagccaagaataagtaggaactttaaaaactggaatagggaagaaaacaaa
caagttgctataacatgtgcagaaaatctgcagaatggtaacataggagaagatcctctt
aagtatattgaggaaaaacaatcagaagttactgtaactctgcaaaaggatgacaatgca
gatataagcaaccctgataaatcagtgaaaacaccaccaaaaactcaaagtgcatatttg
cctgatgtgaaaattaatgctttgaagtctttaaataacctttgtgaacaaagaaaacct
tttactgtctctgaggaaaataatatatcttcaatttctcatattaaggcacagatgcag
aatgaaactttaaagaaagaagatccaaagagtgaaatatcagtgaaaacatctgttgaa
gaattgagtactaataaagataaaaacacaccaagttgcaagagagaggtccaaactagc
ctgtattttgaagccagctcaaaacacaaaactgtgctaactgcacaagaggcttgtaaa
aaattacctgtaaatataggaaaaattcagttcatacatgaaaatggagaaaatgaagtg
ttgggaaatgcacccattcatcccagcactcccttgaatttgggtgagaaaatttgtctt
gatgaagatctcttgactaaaaaccgtagtggagaaggtagtagtaatactatgaacact
accgtccaagaaagtgaaataattatattagattcttcttcagaagaagacatggagtgt
agtgaagaggatactgaactctctgaatcggatgaccctatagaggaatgccggagaatt
ttcaatgagttcgttgaaagcgaagcacagaagcaagaaattgctaagcaggctcttgga
gctcatgttgaagtagatacattggataccaagacaaatatggtttctgggcagaagaag
agaattgcgcacactgcaaaatttgatgtacagaccaacaaagaaatactggtgcctttt
aaagcacctcttccacagcagtcttgtcctaccagaatcctgcaggcacagcaacaggca
gtgcagataacagctgctgttaaaagtggacaggcttttgttgctgcaacttctggacag
aagaaaactgtacctgtattgtcaactactcagattcaaaacgtaggaccaatggtatgt
ttaaatttgcttgaagttcaacctgttgcaaccagcagtggtcaactgaatgtattcctt
caaggaaatgctgtaacagcaatgccatgcagaccttctaatatttcagtaaaaaggatt
gctcccatgcctattaaggtttctagtcggagaaggctttctataattccagaatctgga
tccaaagttccacatgacacaagacaacgatatgtcaacttttttgttgaagaatatttg
aaagtttgtagaacagtaaatgaagcttttgagaaggcattggtagaagaaaaagcaatt
tatgatcgttgcggcagtaaaaatatgtatctgaacatagctgtcaacacccttaaaaag
ctgagggatcaaggtagtctctctccaaatgggcagtcttgtggtagcagatgtactaat
acaactggatctagaaaattggaagagaagaatgatttttcaggaattgttctctataga
attctaaaagactatgttctgactgaggaacaattgcatgagaatggctacccacaacca
aatcctgaaaaacctggcagtgctatattgggtaatggcattacaaaaacagctgtatct
gatgcttcgaaaagagtatgttgtagatgtggagaaatatacactgttactgcttcagga
aagcacattcgtaaagaagaatgcaactaccattctggtagagtactaaaacaaaaagtt
cctggtggcctggaaacacggtatagctgttgtgagggagtcgttgggtctcctggatgc
caggttgcaaagctccatgtccatgatggccgaaaggagaacctggaaggctttgtgaag
acgtttatcaaactaactccagctgatggaaatcatggtgtgtttgcactcgactgtgag
atgtgttatacaacacaaggtctggaacttactagagtgacagtggttgattccagccta
caggttgcctatgagacacttgttaaaccagataatgaaatcatagactataatactaga
ttttctggagtgacagaagaggacttgaagaacacatcctcatctattcgggatgtgcag
gcaatattgctaaacttgttcagtgcagatactattttgattggtcacagcttagaaaat
gatttatttgctcttaagctcattcataacactgttgtggacacagcagtggtgtttcct
catcggctaggcttgcctcataaaagagcacttagaaatctaatggctgattacctcaga
cgaattattcaagatgatgttggtggccatgattctagtgaagatgctgctgcttgtatg
gaactgatgctttggaaagtaaaggaggatactaagggcagaaaatggtga
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