Chelonoidis abingdonii (Abingdon island giant tortoise): 116826892
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Entry
116826892 CDS
T07367
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116826892
Cell adhesion molecules [BR:
cabi04515
]
Cadherins
Protocadherins
116826892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
116826892
NCBI-ProteinID:
XP_032639833
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MSPDLTLSRAELSSLLLCLLAAGCLTEMVRYHTYEEDAPGTVIGVLWDDLQSSSGDRPLG
SFWLMEQFSNSSLVRVREGDGQLSIGEEGIDRERLCGQSLQCVLAFDVVSFWQEQYRLVH
VELEVRDINDNAPRFPQAHIPLEVSESAAPGTRLPLEIAVDPDVGSNSIQSFQLSRNSHF
GIEAQPRADGGKSAELVLLQELDRETQAAYTLELVAQDGGSPARAGTATVSVRVLDANDN
SPAFPQGSVTVELGEDAPRGSLLLDLDAADPDEGPNGEIVYGFGSQVPAEARQLFRLDPL
SGRLTLEGPVDYERQRTYELDVQAQDRGASPLAATCKVIVRLADVNDNAPGISISPLSGA
PAGAGVAYVSEAAARDSFVALVSTSDRDSGPNGQVRCALYGHEHFALQRAYADSYVLVTA
APLDRERVAEYNLTLVAEDLGSPPFKSVRQYTVRVSDENDNAPLFSKPVYEVAVLENNPP
GAYLATVVARDPDLGRNGKVLYRLLETESPGGGPGSALVSVDPRSGSVRARQPLDCEELP
LVEAEIEACDGGAPQLCQRARLRLRVVDQNDNAPVITSPPLANGSAELPLPASAPAGYLI
ARFAASDADQGANSELSYSLLGGAHPVVALNRDTGELALRRRLPGGAAGAAFPLIVAVHD
GGRPSLSCTAAVRLVPTDTLPSSVEIVVVQPSAEELQLQPSLDLSVVLIAVLAGGCGLLL
IAIIAVASTCRRSKSHFQPGPEEQGRGKEARLLKGSGSQAGSSYSGQAGSCQLSVATESD
NPSDTSEAEESSRESLCHSAQERKARSRDSQGQVLVPFHPPCLWQERESALSLSSQSTPD
QFSAKDSGKGDSEFNDSDSDISGEGLKRPPSQSAEKQVGTAACTDGQTYKETERYCRFYV
HQSQTSKTIPLHYENDYTVAYSTPIYQPILQLGKPNFLPQQPKLKEYQVNIPKTERLQSV
FERVLSDGPATPPTTLSRQYKGLNLPPQNTLLPSASEVATSF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgatctcacactgtccagagctgaactaagctctctgctgctgtgtctcctg
gctgcagggtgcctgactgagatggtcaggtaccacacgtacgaggaagacgcccccggt
acagtcattggggtgctgtgggacgatttgcagtctagctctggggacagacccctcggc
agtttctggctgatggagcagttcagcaacagctcactggtccgggtgcgggagggcgac
gggcagctgagcatcggcgaggaagggatcgaccgggagcggctgtgcggccagtccctc
cagtgcgtcctggctttcgacgtggtgagcttctggcaggagcagtaccggctggtgcac
gtggagctggaggtgcgggacatcaacgacaacgcgccgcgcttcccccaggcgcacatc
ccgctcgaggtgtccgagagcgccgcgcccggcacccgcctgccgctggagatcgccgtg
gacccagacgtgggctccaactccatccagagcttccagctctcgcgcaacagccacttc
ggcatcgaggcgcagccgcgggcggacggcgggaagagcgccgagctggtgctgctgcag
gagctggaccgcgagacccaggccgcctacaccctggagctggtggcccaggacggcggc
agcccggcccgcgcgggcacggccacggtgagcgtccgggtgctggacgccaacgacaac
agcccggccttcccgcagggctcggtcacggtggagctgggcgaggacgcgccgcggggc
tccctgctgctggacctggacgcggccgatcccgacgaggggcccaacggggagatcgtc
tacggcttcggcagccaagtgccggccgaggcgcggcagctcttccggctggacccgctc
tcgggccgcctgacgctggaggggccggtggattacgagcggcagcggacctacgagctg
gacgtgcaggcgcaggaccggggcgccagccccctggcggccacgtgcaaagtcatcgtg
cgcctggccgacgtgaacgacaacgcgccgggcatcagcatcagccccctgagcggcgcc
cccgccggcgccggggtggcctacgtcagcgaggcggcggcgcgcgacagcttcgtggcg
ctggtcagcacctcggacagggactcgggccccaacgggcaggtgcgctgcgccctctac
gggcacgagcacttcgcgctgcagcgcgcctacgccgacagctacgtgctcgtcaccgcc
gcgccgctggaccgcgagcgcgtcgccgagtacaacctgaccctggtggccgaggacctg
ggctcgccgcccttcaagagcgtccggcagtacacggtgcgcgtgagcgacgagaacgac
aacgcgccgctcttctccaagcccgtctacgaggtggcggtgctggagaacaacccgccg
ggcgcctacctcgccaccgtggtggcccgggaccccgacctgggccgcaacgggaaggtg
ctttacaggctgctggaaacagagagcccgggcggcggccccgggtccgctctggtctct
gtggatccccgcagcgggtccgtccgcgcccggcagcccctggactgcgaggagctgccg
ctggtggaggcggagatcgaagcctgcgacgggggcgccccgcagctgtgccagcgggcc
cgcctcaggctccgggtggtggatcagaacgacaacgccccggtcatcacctccccgccg
ctggccaacggctccgccgagctgccgctgcccgccagcgcccccgccgggtacctgatc
gcccgcttcgcggccagcgacgcggaccaaggcgcgaactccgagctctcctactccctc
ctgggcggtgcccacccggtggtcgccctgaaccgggacaccggggagctggccctgcgg
aggaggctgcccggaggggccgcgggagccgccttcccgcttatcgtcgctgtccacgac
ggcgggaggccgtcgctgtcctgcacagccgccgttcggctcgttcccacggacacactc
ccctctagcgtggagatcgtggtcgtgcagccctcggcggaggagctgcagctgcagccc
agcctggatctctccgtggtcctcatcgctgtgctggccggaggctgcggcttgctgttg
atcgctatcatcgccgttgcctccacctgcaggaggagcaagagtcacttccaacctggg
cccgaagagcaggggagaggcaaggaagccaggctgctgaagggctcgggctcccaggca
gggagctcctactcgggccaggcaggctcctgccagctctctgttgccactgagtctgat
aaccccagtgacacttccgaggccgaggagagcagcagagagtccttgtgtcattctgcc
caagagaggaaagccaggagcagagactcccagggtcaagttcttgttccttttcatccc
ccatgtctttggcaggagcgagaatctgctttgagtttaagctcccagtcaactcctgat
cagtttagtgcgaaagacagtgggaaaggagatagcgagtttaatgatagtgattctgat
atcagtggtgaggggttaaagaggccaccttcacagtcagctgaaaagcaagttggtact
gcagcctgtacagatggacagacctacaaggaaacagaaagatattgtagattttatgtc
caccagtcccaaacaagcaaaaccatcccattgcattatgaaaatgattatacagttgca
tattctacaccaatttatcagcccatccttcagcttgggaagcccaattttcttccacaa
cagccaaagctgaaagagtatcaagttaatattcctaaaactgaaagactacaaagtgta
tttgaaagagttctaagtgatgggccagcaacaccaccaaccactctgtcaagacagtat
aagggactaaatctccctccacagaacactttactccccagtgcctctgaagtagcaaca
tcattctga
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