Chelonoidis abingdonii (Abingdon island giant tortoise): 116827014
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Entry
116827014 CDS
T07367
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116827014 (TRIM71)
04121 Ubiquitin system [BR:
cabi04121
]
116827014 (TRIM71)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116827014 (TRIM71)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116827014 (TRIM71)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116827014 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_5
zf-C3HC4
zf-RING_UBOX
Vgb_lyase
zf-RING_2
Totivirus_coat
DUF4094
Motif
Other DBs
NCBI-GeneID:
116827014
NCBI-ProteinID:
XP_032640028
Ensembl:
ENSCABG00000015987
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MASFAEADFQLCPLCKEMCGSPAPISSNSSTSSSSSQTSNSSSAGGSSCAPSRRLHVLPC
LHAFCRQCLEAQRQHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVVV
AAAAAEEQKNNGRGGGSGSNNRHHQPRPPQQQQHRAAGSGSSPPPASAASSSPPSLRGAA
CGSLLPPAPHRPQGDRCSXCDEGNAQRLRCXDCQEHLVRQRVRRTSASRLTKDHFTSARR
GARQRRRAAPGPAAQLALGQSYPAAPYSILASVFPDRTSYCQHHDDEVLHFYCDTCSVPI
CRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKA
KVVQSEVKAMTSRHKKVLEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISA
VQQVLEEGRSMDILLARDRMLAQVQELKNVRGLLQPQEDDRVMFTPPDQALYMAVKSMGF
VSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISSVVMGPDGNLFG
ADVNDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVMVKSGRSYIGIGLPGLSFG
SEGDNDGKLCRPWGVCVDKEGYIMVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPA
GVACDISRRIVVADKDNHRIQIFTFDGQFILKFGEKGTKNGQFNYPWDVAVNTEGKILVS
DTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPD
CQSARFLGSEGTSNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSG
FGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttgctgaggcggacttccagctatgcccgctgtgcaaggagatgtgcggc
tcgccggctcccatctcctccaactcctccacctcctcctcctcctcgcagacctccaac
tcctcctcggccgggggttcgtcctgcgccccgtcccgccgcctgcacgtcctgccctgc
ctgcacgccttctgccgccagtgcctggaggcgcagcgccagcacccgggcgcgggggac
gcactcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcgggc
atggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtggtggtggtg
gcggccgccgccgccgaggagcaaaagaacaacggccggggaggcggcagcggcagcaac
aaccggcaccaccagccccgcccgccgcagcagcagcagcaccgcgcggccggcagcggc
tcgtccccgccgccagcctctgctgcctcctcgtcccctccctccctacgcggggcggcc
tgcggctcgctgctccctccggcgccgcacagaccgcagggcgaccgctgcagcnnctgc
gacgagggcaacgcgcaacgtttgcgctgcnnggactgccaggagcacctggtgcgacaa
cgcgtgcggcgcaccagcgcgtcccgcctcaccaaggaccacttcacgagcgctcggagg
ggcgcccgccagcgccgccgcgccgcccccgggccggccgcccagctcgccctcggccag
tcctaccccgccgcgccctacagcatcctcgcctccgtcttcccggaccggaccagctac
tgccagcaccacgacgacgaggtgctgcatttctactgtgacacttgttctgtccctatc
tgccgggaatgcaccatgggacgacatgtgggtcatagctttatctacctccaagatgcc
ctccaggattccagaaccctcaccattcaacttctagcagatgctcagcaaggacgccag
gctattcagctgagtattgaacaggcccaagctgtggcagagcaggttgagatgaaagca
aaggtggtgcagtctgaagtcaaagctatgacatctcgacataagaaggtcctggaagaa
cgggagtgtgagctgctgtggaaggtggaaaagattcgtcaagtcaaagccaagtccctt
tacctgcaagttgaaaagttgcgtcagaatctaaataaactggacaacactattagtgca
gttcagcaggtcctagaggagggtcgtagcatggatattctcctagctcgggatcgcatg
ctggctcaagtgcaggagctgaagaatgtgagaggtcttctacagccgcaggaggatgac
agagtcatgttcactcctcctgaccaggctctgtatatggccgttaaatcaatggggttt
gtcagcagtggggcttttgctcctctgaccaaagccactggggaaggtctcaaacgtgca
ctacagggcaaagtggcctccttcacagtgataggctacgaccatgatggtgaaccacgc
ctttcggggggcgatatgatctcttcagtggtgatgggccctgatggaaacctatttggt
gcagatgtcaatgatcagcagaatggaacctacctggtcagttacagaccacagctggag
ggagagcatctagtctctgtcatgatgtgcaaccagcacatagagaacagtccgttcaag
gtcatggtaaaatctgggcgcagttacattggcattggactaccagggctttcatttggc
agcgagggagacaacgatggcaagctgtgtcgcccctggggagtttgcgtagacaaagaa
ggatacatcatggttgctgatcgcagtaataaccgtattcaggtgtttaagccctgtggc
acctttcaccacaaatttggcactttgggttccaggcctggtcagttcgatcgccctgct
ggtgttgcctgtgatatctcgcgtaggattgtcgtggctgacaaggataatcatcgcatc
cagatctttacatttgatgggcagttcattctgaaattcggggaaaagggaaccaagaat
gggcaattcaattacccatgggatgtggcagtcaacactgagggcaaaatcctggtctct
gacacgaggaaccatcggattcaactgtttggacctgatggtgtgtttctgaataaatat
ggctttgaaggggcactctggaagcactttgattctccaagaggtgtaactttcaatcat
gaaggtcatctggtagtgacagatttcaacaaccatcgcctcctggtcatccatccagat
tgccagtcagcacgcttccttgggtcagaaggcaccagcaacggccagttcctgcgccca
caaggcgtggctgtggatcaagagggtcgcatcattgtggctgattctaggaaccaccga
gtgcagatatttgagtcaaatggtagttttttatgcaaatttggcactcagggaagtggc
tttggtcagatggaccgaccttcaggtatagctgtcacccctgatggcatgattgttgtg
gttgacttcggaaacaatcgaattctcgtcttctaa
DBGET
integrated database retrieval system
