Chelonoidis abingdonii (Abingdon island giant tortoise): 116827034
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Entry
116827034 CDS
T07367
Symbol
CNTN4
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116827034 (CNTN4)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
Contactins
116827034 (CNTN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
V-set_CD47
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
116827034
NCBI-ProteinID:
XP_032640061
Ensembl:
ENSCABG00000017322
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MRLLWELLVLQSFMLCLADDNMLHGPVFIQEPNNVIFPLDSEEKKVKLSCEVKGNPKPTI
RWKLNGTSVDVGMDYRYSIVGGSLLINNPNKTQDIGMYQCIATNSFGTIVSREARLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPSFVHQDNRRFVSQETGN
LYIAKVETSDVGNYTCVVTNTVTNNKVLGPPTPLILRNDGVMGEYEPKIEVQVPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQIPRKARRQKSSGVLEIPNFQQEDAGLYECVAE
NVRGKNMARGQLTFYAPPNWIQKISDAHKAIDENIFWECKANGRPKPSYSWLKDGEPLMP
RDRIQIEHGALTITNVNLSDEGMYQCVAENRHGVIFTSAELSVIALGPDFSKTLLKRLTL
VKVGGEVIIECKPKASPRPTYIWKKGKEILRENERINIMDDGSLRIVNVTKADAGSYSCI
ATNHFGTASSTGSLVVKDPTRVVVPPSSTDVTVGESIVLPCQVSHDHSLDIMFTWSFNGH
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTTVDKLSATADLIVRGPPG
PPEAVTIDEITDTTAQLSWRPGADNHSPITMYVIQARTPFSVGWQAVNTVPDIIDGKTFT
ATVVGLNPWVEYEFRAVAANLIGIGEPSRPSEKRRTEEALPEITPANVSGGGGSKSELVI
TWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASSDASRYVFRNESLPPFTPYEVKVG
VYNNKGEGSFSPVTVVYSADEEPTRAPTSVFAKSLSASDIEVYWTSPRENQSKGRIQGYE
VRCWRHEDKEENARKIRTIGNRTSTKITNLKGNALYQLAVKAYNTAGTGPSSATVNVTTK
KPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTS
VELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGTSTSNACTLSAISTIM
ISLTARSSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggaactgctcgtgctgcaatcattcatgttgtgccttgcagatgac
aacatgctgcatggaccagttttcattcaggaaccaaacaatgtgatttttccactggat
tctgaggaaaagaaagtgaagttgagctgtgaagtaaagggaaatcctaaaccaactatc
aggtggaagttaaatggaaccagtgttgatgttggtatggattaccgctacagtatagtg
ggaggcagcttgttgatcaataatcccaataaaacccaagatattggaatgtaccagtgc
atagcaacaaactcatttgggaccattgttagcagagaggcaagacttcagtttgcttac
cttgaaaacttcaagacaagaacaagaagtacagtgtcagtccgacagggtcagggaatg
gtactgctgtgtggaccaccaccacattctggagagctgacttatgcatggatcttcaat
gaatacccatcatttgtgcaccaggataatcgtcgctttgtttctcaagagactgggaat
ttgtacatagcaaaggtggaaacatctgatgtgggcaactatacatgcgtggtgacaaac
actgtaacaaataataaggtgctgggccccccaactcctttgatactgaggaatgatggg
gtgatgggtgaatatgagccaaaaatagaagtacaggtcccagaaactgttccatctgca
aaaggaacaactgtgaaactggaatgctttgccttgggaaacccagttcctactattagc
tggagaagagcagatggtaaacaaatacccaggaaagccaggagacaaaaatcgagtggg
gttctcgaaatcccaaactttcagcaggaagatgctggtctatatgagtgtgtggctgaa
aacgtgagaggaaagaacatggcacgagggcagcttacgttttatgcaccacctaactgg
attcagaaaataagtgatgcgcacaaagctatagatgaaaacatcttttgggagtgtaaa
gcaaatgggagaccaaagccttcatacagctggctaaaggatggtgaaccactgatgcct
cgggacagaattcagatagaacatggagcacttacaataacaaatgtgaatctgtcagat
gaaggcatgtaccagtgtgtagcagaaaatagacatggagtcattttcaccagtgcggag
ttgagtgtaattgctttgggtccagacttttccaaaaccctcttgaaaagattaactctt
gttaaagtgggcggtgaagtgatcatagaatgtaagccaaaagcttcccccagacctact
tatatttggaagaaaggaaaagagatcctaagagaaaatgagagaatcaatattatggat
gatggaagcctccgaattgtcaatgtcactaaggcagatgctggaagttattcctgtata
gcaacaaaccattttggtacagctagcagcactggaagtttggtggtgaaagatccaaca
cgggttgtggtgccaccttccagcacggatgtcactgttggagaaagtattgttctgcct
tgccaggtatctcatgatcactcgctagatattatgtttacttggtcatttaatggacac
ctgatagactttgagaaagacggggatcactttgaaagagttggagggcaggattcagct
ggtgatttgatgatcagaagcattcagctgaagcatgctgggaaatacgtctgtatggtg
caaacaactgtggacaagctatcagctactgcagacctgattgtaagaggtccaccaggc
ccacctgaagccgtgacaatagatgaaatcactgatactacagctcagttatcctggagg
ccaggagcagataatcacagccccattactatgtatgtaattcaagcaaggaccccattt
tctgtgggatggcaagcagtgaacacagttccagatatcattgatggcaagacattcact
gcaactgtggtgggattaaacccttgggttgagtatgaattccgagcagttgcagccaac
ctcattgggattggggaaccaagcagaccttcagagaaaagaagaacagaagaagctctt
cctgaaatcaccccagctaatgtcagtggaggtggagggagcaagtcggagctggtcatt
acctgggagacagtccctgaagaattacagaacggaggtggctttggttacgtggtggct
ttccgacccttgggcacagtgagctggatgcagactgtagtagcttcttctgatgcctcc
agatacgtgtttcgaaatgagagcctgccgccattcacgccctatgaagttaaagtgggc
gtgtacaacaataaaggggaaggttcttttagccccgtgacagtggtatattctgcagac
gaagaacccaccagagctccaaccagcgtctttgccaagagcctttctgcttcggacatt
gaagtttattggacctctccgcgtgagaatcagagtaaaggaaggatacaaggttatgag
gttagatgttggagacatgaagataaggaagaaaatgctagaaaaatcaggactattggt
aatcgaacatctacaaaaatcactaatctgaagggcaatgcattatatcaattagctgtc
aaggcatacaacaccgcagggacaggaccctccagtgctacagtcaatgtcactaccaaa
aagccaccaccgagtcaaccacctggaaacatcatatggaattcgtctgactccaagatt
atactgaactgggatcaagttaaagcactggataatgaatcagaagtgaaaggatacaaa
gttttatacagatggaacagacagagtagcacatctgtaatcgaaactaataaaacatct
gtcgagctttctttgcctttcgatgaagattacatcatagaaataaagccatttagtgat
ggaggcgatggcagcagcagtgaacaaatccgaattccaaagatatcaaatgcatatgcg
agaggatctggtacttctacttcaaatgcgtgtacattgtcagccatcagcacaataatg
atatccctcacagctagatcaagtttatga
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integrated database retrieval system
