KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116827136
Entry
116827136         CDS       T07367                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116827136 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cabi03400]
    116827136 (TDP1)
DNA repair and recombination proteins [BR:cabi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116827136 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 116827136
NCBI-ProteinID: XP_032640318
LinkDB
Position
4:121255158..121367218
AA seq 637 aa
MLSWVLDKGRIVLPKRFQSKDLFVCTNMSQESEHGKWTVSSSDESTEENDDNAEEPSTSS
LSHSGHGKTSGSQYPCSEARKVGHKRKASPVKFNDTSFPTGISPAEIQRTSQEGLGWCLS
SSDEEPESEGQPQHAQKEAVKEEKYSAPKMQPSCRFEDNELPVSQKPEKHYKVASESQDT
WDLLNGGNPFRFFVTKVKGIKSKYNSGALHIKDILSPLFGTLVSSAQFNYCIDVAWLIRQ
YPQEFRKKPLLIVHGEKRESKAELHSQARPYENVRLCQAKLDIAFGTHHTKMMLLLYEEG
LRVVIHTSNLIDDDWNQKTQGIWLSPLYPQLPPGTTGSAGESVTNFKSDLIHYLMSYNSP
TLKEWADIIQGHDLSETRVYLLGSTPGRYQGNQKEKWGHLRLRKLLKQYTSAIPAQESWP
VIGQFSSIGSMGADQSKWLCSEFRESLVMLGSSVKTLAKPDVPIHLIYPTVDNVRQSLEG
YPAGGSLPYSIQTAQKQLWLHSYFHKWSAETSGRSHAMPHIKTYMRPSPDFQKIAWFLVT
SANLSKAAWGALEKNGTQLMIRSYELGVLFLPSAFGLDTGYFHVKKKMFSGSNEPVTSFP
VPYDLPPEQYGSKDRPWIWNIPYTKAPDTHGNMWVPS
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgttgagctgggtgctggacaaaggcaggattgtcctcccgaagcgctttcagtctaag
gatttgtttgtctgcacaaacatgtctcaagaaagtgagcatgggaaatggacggtatct
agcagtgatgaaagtacagaagaaaatgatgataatgctgaagagccatctacgtcttca
ttgtctcacagtggacacggcaaaactagtggatcacagtacccatgttcagaggctaga
aaagttggtcacaagagaaaagcctcccctgtgaaatttaatgatacaagttttccaaca
gggatttcaccagcagaaatccagagaacttcccaagaaggtttaggctggtgcctttca
agtagtgatgaggagcctgaatctgaaggtcagccacagcatgcacaaaaggaagcagtc
aaagaggagaaatacagtgctcctaaaatgcagccttcatgtagatttgaagataatgag
ctcccagtgagccaaaagccagaaaaacattataaggtagcaagtgaaagccaggacact
tgggatttgttgaatggagggaaccctttccgattctttgtcactaaagtcaaaggtatt
aagtctaagtacaactctggagcacttcacataaaagatattttgtctcctctctttggg
actcttgtatcttctgctcagtttaactattgtatagatgtggcatggctcataagacag
tatccacaggaattcaggaaaaaaccattattaatagtacacggtgaaaagcgagaatcc
aaggctgagctgcattcacaggcacgcccatatgaaaatgttcgcctttgccaggctaag
ctggatattgcctttggaactcaccacacgaaaatgatgttgttgttatacgaagaaggt
cttcgagttgtgatacacacatccaatcttattgatgatgattggaaccagaaaactcag
ggaatatggctaagccccctatatccacagctaccgcctggaaccactggttctgctggt
gaatctgtaaccaattttaagtctgacctaatacactatttgatgagttataattcccct
actctcaaggaatgggctgacatcatccaagggcatgatctttcagagacaagagtatat
ctgcttggatcaaccccaggacgataccaaggcaaccaaaaagaaaaatggggtcatctt
aggcttagaaagcttttgaaacagtatacatcagcaataccagcacaagaatcttggccg
gtgataggacagttttcaagtattggatcaatgggagctgaccagtccaagtggttgtgc
tcagaatttcgagagagtctggttatgctaggcagtagtgtgaagactctagcaaaacct
gacgttcctattcatttgatttaccctactgtggacaatgtgaggcaaagtttggaagga
tatcctgctggtggctctcttccatacagtatacaaactgcacagaaacaactttggcta
cactcttatttccacaaatggtcagcagaaacctcaggccgcagccatgctatgcctcac
attaagacttacatgaggccatctcctgacttccagaagattgcgtggtttttagttaca
agtgccaatctttccaaagctgcctggggagctctagagaaaaacggcacgcaactgatg
attcgttcatatgaacttggagtcctttttctaccttcagcatttggattggatacaggt
tacttccatgtgaagaagaaaatgttttcaggaagtaatgagccagtgacatcttttcct
gtgccttatgatctgcccccagagcaatacggaagcaaagatcgcccatggatttggaat
attccttataccaaagcacccgatacacatggaaacatgtgggttccatcataa

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