Chelonoidis abingdonii (Abingdon island giant tortoise): 116827140
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Entry
116827140 CDS
T07367
Symbol
THUMPD2
Name
(RefSeq) THUMP domain-containing protein 2 isoform X1
KO
K28400
U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cabi03041
]
116827140 (THUMPD2)
Spliceosome [BR:
cabi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
116827140 (THUMPD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0020
Methyltransf_31
Methyltransf_25
Methyltransf_11
Ubie_methyltran
MTS
AviRa
Methyltransf_12
RlmL_1st
N6_N4_Mtase
THUMP
Methyltransf_15
CMAS
N6_Mtase
Methyltransf_4
Methyltransf_18
Cons_hypoth95
PrmA
PHD_like
Motif
Other DBs
NCBI-GeneID:
116827140
NCBI-ProteinID:
XP_032640324
Ensembl:
ENSCABG00000005264
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MAEGSGCAGPSIRYFCTAGRGLEPFLLREVRARLGATQVEYVSGKVFFTTNSELSKLKKL
KSGERLFLLLKKHAAISPSRNKGKVFNEIQKLVIEDPRCWLDIISIWKRLHGNKVEQGNL
SKENPESLKRKSEEEISIIRKKQKEQILETVSDECHVEEQKKSVVLETNDDMDFLTERKT
LLEETSESRIEKSVDSNNHSFSFRVSCRCSGAIAKVFTSQEVGRVLGITLVKQLGWQTDL
RNPDLELFVHLNDIYSVVGIPVFRLPLATREYIQTAGLRSTVAWAMASLAEINAGAFVLD
PMCGLGTILLEAAKEWPNVHYLGADINDSQLQGAHENIKAAGLMDKIELLKASVIALPLP
SESVDVVISDIPFGKKFKITKDIKLLPDILREMERVLHVGGTVVLLVSQDVRKHMGGCIS
NCVENDTSLNATSDNRNGAAMVKDLNPKEENGSPRSISSSIKGVETEHFNNITCFGSLAA
VESYGISLGKTDAFIYKYRKMPAAGMQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggtcgggttgtgctggcccctctatccgctatttctgcacggccggccgg
ggcctggaacccttcctgcttcgggaggtgcgggcccggctgggggccacgcaggtggag
tatgtttcaggaaaagttttctttaccaccaattctgagttgagtaaattgaagaagctg
aagtctggagaacgattatttttgctgctgaaaaaacatgcagcaatttctccctctaga
aataaaggaaaagtatttaatgaaattcaaaaacttgtaattgaggaccccagatgttgg
ctggatattatttccatttggaaacgtcttcatggaaataaagttgaacaaggaaacctc
tctaaagaaaatccagaatccctaaaaagaaaatcagaagaagagataagtatcataaga
aaaaaacagaaagaacaaatattagagacagtttctgatgaatgccatgtggaagagcaa
aagaaaagtgtggtactagaaacaaacgacgacatggactttttgactgaaagaaaaact
ttgctagaagagacatctgaaagtagaatagagaaatcagttgatagcaataaccacagc
ttcagtttcagagtttcttgtcgctgtagtggagcaattgcaaaagtatttacttcacag
gaggtgggaagagtacttggaataactcttgtaaaacagcttgggtggcaaacagatttg
agaaaccctgatctagagctctttgtacatctaaatgatatttactcggtggtggggatt
cctgtcttcagacttccactggcgaccagagagtatatccaaactgcaggactccgatct
actgttgcatgggctatggcatctcttgctgaaatcaatgctggtgcatttgttttagat
cctatgtgtggattaggaacaatactcttggaagctgcaaaagaatggcctaatgtacat
tacttgggtgctgatataaatgattcacaactacaaggtgcacatgaaaacattaaggct
gcaggcttgatggataaaattgagttacttaaagcatctgtcatagcattgccattacct
tcagaaagtgttgatgttgtgatttcggacattccatttgggaaaaagttcaagataaca
aaagacataaagcttctaccagatattcttcgagaaatggaaagagtgcttcatgttgga
gggacagttgtattacttgtgagtcaagatgtccgcaagcacatgggtggctgtattagc
aattgtgttgaaaatgacacctctttgaacgccaccagtgacaacaggaatggagctgct
atggtgaaagacttgaatcccaaagaggaaaatgggagtccaagaagtatttcctcttca
attaaaggtgtggaaactgaacacttcaataacattacatgctttgggtctttggcagca
gtagaatcctatggaattagccttggaaaaacagatgctttcatatacaaatataggaag
atgcctgctgctggaatgcagtag
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