Chelonoidis abingdonii (Abingdon island giant tortoise): 116827227
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Entry
116827227 CDS
T07367
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116827227 (TRIM41)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116827227 (TRIM41)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116827227 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
Nop14
zf-RING_6
zf-RING_5
DUF1664
Nrf1_DNA-bind
Motif
Other DBs
NCBI-GeneID:
116827227
NCBI-ProteinID:
XP_032640487
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MAAAGEGGSMGGGQPNAVETLQEEAVCAICLDYFTDPVSIGCGHNFCRVCITQLWGGEEE
GEGQAEYEAVGDDVGMGGEEDDVDELDDDDNIEYNEEEEDGDDVAEEEDDMWSEEDEDTD
LWDDPGEDDMWEDEVGDELFFEDDYDEEVMEEEDVEEEEEEPLPPPPPVAVATRPRHPPT
FTCPQCRKTFPQRNFRPNLQLANMVHIIRQMHPHPQKLASPAAGTSASGRSGSVAGVAGG
LEKRALCEKHQEPLKLFCEVDEQAICVVCRESRSHKHHSVVPLEEVVQDYKMKLQGHLDP
LKKKLDAVLKQKSSEEEKITELKNKMKLEIKEFESDFELLHQFLIGEQVLLLHQLEERYE
ALLARQSSNISQLEEQGATLGRLIAEAEDKSRQDGLQLLKDIKDTFIRCESVKFQEPETV
PVDVGKKYRNYFLQDVVMRKMEKVFRKVPQADVTLDPDTAHPHLSLSLDRRSVKLGERRQ
DLPDNPKRFDSDYCVLGSQGFSTGRHYWEVEVGGRRGWAVGAARETARRKEKTGGPYQKR
EIWCVGANGKKYQALTATEQTALPPGEKLRRFGVYLDYERGQLCFYNAENMAHIHTFNAT
FRERIFPFFRILAKGTRIKICT
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctggggaaggtggctccatggggggtgggcagcccaacgcggtggagacg
ctgcaggaggaggccgtctgcgccatctgcctcgactacttcactgaccctgtttccatt
ggctgcggccacaacttttgccgcgtctgcatcactcagctctggggaggtgaggaagag
ggtgagggccaggctgagtacgaggccgtgggggacgacgtggggatgggcggtgaggag
gatgacgtggatgagttggacgatgacgacaatatagagtacaacgaggaggaagaggat
ggggatgatgtggccgaggaggaagatgatatgtggagcgaggaagacgaggacaccgac
ctgtgggatgacccaggggaggacgacatgtgggaggacgaggtaggagatgagctcttc
ttcgaggacgattacgatgaggaggtgatggaggaagaggacgtggaggaggaggaggaa
gagccgctgccaccacctcccccagtagcagtggccacgcgacctcgacaccccccaacc
ttcacctgtccccagtgccgcaagaccttcccccagaggaacttccggcccaacctccag
ttggccaatatggtgcacatcatccgacagatgcacccacacccccagaagctcgcgtca
ccggccgctgggacctcagcatctgggaggtctgggagtgtggcaggagtggcagggggg
ctggagaaaagagccctgtgtgagaaacaccaggaacccctcaagctcttctgtgaggtg
gatgagcaggccatatgtgtggtgtgccgggagtcccggagccacaagcaccacagcgtt
gtcccgctggaggaggtggtgcaggattacaagatgaaactccagggccacctggatccg
ctgaagaagaagctggatgcagttctgaaacagaaatcaagcgaagaggagaaaattact
gagctgaagaacaagatgaagctggagatcaaggagtttgagtcggactttgagctgctg
caccagttcctgatcggggagcaggtgctgctgctgcaccagctggaggagcgctacgag
gcgctgctggcccgccagagcagcaacatcagccagctggaggagcagggtgccaccctc
gggcgcctcatcgctgaggctgaggacaagagcaggcaggacgggctgcagctgctcaag
gacatcaaagacaccttcatcaggtgcgaaagcgtcaaattccaggaaccggagacagtg
ccggtagatgtgggaaagaaataccgcaattacttcctgcaggacgtggtaatgaggaag
atggagaaggtcttcaggaaagtccctcaagctgacgtgaccctggaccccgacacggcc
catccccacctgagcttgtccctggatcgccggagcgtgaagctgggtgaacgtcgccag
gacctacctgacaaccccaagcgcttcgactctgactactgcgtgctgggctctcagggc
ttcagcacagggcgccactactgggaggtggaggtggggggccggcggggctgggcggtg
ggggcagcccgggagacggcccggcggaaggagaaaacaggcggcccctaccagaagcgg
gagatctggtgtgtgggcgccaacgggaagaagtaccaggcattgacagccacggagcag
acagcgctgccccccggggagaagctccggcgctttggggtctacctggactacgagcgg
ggccagctgtgcttctacaatgccgagaacatggcccacattcacaccttcaatgccacc
ttccgcgagcgcatcttccccttcttccgcatactggccaagggcacacgcatcaagatc
tgcacctga
DBGET
integrated database retrieval system
