Chelonoidis abingdonii (Abingdon island giant tortoise): 116827411
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Entry
116827411 CDS
T07367
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04142
Lysosome
cabi04144
Endocytosis
cabi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116827411 (CLTC)
04142 Lysosome
116827411 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116827411 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116827411 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cabi04147
]
116827411 (CLTC)
Membrane trafficking [BR:
cabi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116827411 (CLTC)
Exosome [BR:
cabi04147
]
Exosomal proteins
Proteins found in most exosomes
116827411 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
116827411
NCBI-ProteinID:
XP_032640831
Ensembl:
ENSCABG00000008271
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVQAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNFFS
KTKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDGIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
TM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaattctgcccatccggttccaggagcatctccagctccaaaatctggggatc
aacccagctaacattggcttcagtactctgactatggagtcagacaaattcatctgcata
agagagaaagtaggagaacaagcacaagtggtgattattgacatgaatgaccccagcaat
cccattcgcagaccaatttcggctgacagtgctatcatgaatcctgctagcaaagtcatt
gcactaaaagctgggaaaacgcttcaaatctttaacattgagatgaagagtaaaatgaag
gctcatactatgactgatgatgttaccttctggaaatggatttcgctgaacactgttgct
cttgtaactgacaatgcagtctaccactggagcatggagggagaatctcagcctgtgaaa
atgtttgaccgacactctagtctggcaggatgccagatcatcaactatcgtacagatgct
aagcaaaaatggttacttctgactggcatatctgcacagcaaaatcgtgttgtgggagcc
atgcagctttattctgtagatagaaaagtgtcccagcctatcgaggggcatgcagctagt
tttgctcagttcaagatggaaggtaatgctgaggaatccactcttttctgttttgcagta
agaggtcaagctggaggcaagttgcatatcattgaagttggcacaccaccaacagggaac
caaccatttcccaagaaagcagtggatgtgttctttcctccagaagcacagaatgacttt
cctgtagcaatgcagattagtgaaaaacatgatgtggtgtttctgataacaaaatacggt
tacatccatttgtatgaccttgaaactggcacctgcatctacatgaatagaatcagtgga
gaaaccatatttgtcactgcaccgcatgaagcaactgctggaattataggagttaacaga
aagggacaagtgctctcagtatgtgtagaggaagagaacataattccttacatcactaat
gtgctacaaaatcctgacctagctttgcgaatggctgtccgcaacaatctggcaggagct
gaggaactctttgcccgaaaattcaatgcactgtttgcccagggaaactactcagaggca
gcaaaagtggcagcaaatgcaccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagcgttcaagcacagccaggtcagacttctcccttgctccagtactttggaatt
ctgctagaccaaggtcagctgaacaaatatgaatccttggaactctgcaggccagtgctt
cagcagggacgcaaacagcttctggagaaatggttaaaagaagataagttggagtgttca
gaggaattgggagatctagtgaagtctgtggaccctacactggcacttagtgtctatctg
agagctaatgttcctaacaaggtcattcagtgttttgctgaaacagggcaagtccagaag
attgttctgtatgctaagaaggttggatatactccagactggattttcctgctgaggaat
gtaatgcgaatcagccctgaccaaggacagcagtttgctcaaatgctagttcaggatgaa
gaaccccttgcggatatcacacaaattgtggatgtttttatggaatacaacctaattcag
cagtgtactgccttcttgctggatgcattgaagaataaccgcccttctgagggtcccctg
caaacacgtttacttgagatgaaccttatgcatgcacctcaggttgcagatgctatcttg
ggaaaccagatgtttacccactatgacagggctcacattgcacagctctgtgagaaagct
ggcctgctgcagagagcattagaacacttcactgacttgtatgatatcaagcgtgcagta
gttcacactcatcttctcaaccctgagtggctggtgaattattttggctccctatcagtg
gaagactccctggagtgtctgcgtgccatgctttctgctaacattcgtcaaaacctgcag
atttgtgttcaggtagcttcaaaataccatgaacaactgtcaacacagtcacttattgag
ctctttgagtcttttaagagctttgaaggtctattttatttcttgggctcaattgtaaac
ttcagccaggacccagatgtgcatttcaaatatatccaagctgcatgcaagacagggcaa
attaaagaagtggaacgaatctgcagagaaagcaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagcaaaactgactgaccagttaccactgatcattgtatgtgatcgc
tttgactttgtccatgaccttgtgctgtacctgtatagaaataacctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgtctgcctgttgtcatcgggggattgctt
gatgtagattgctctgaagatgtgataaagaacttgatccttgttgtgagaggtcaattc
tccactgatgagcttgtggcagaagtagaaaaaagaaacaggctaaaactgctccttcca
tggttagaagcaagaattcatgagggttgtgaggaacctgctactcataatgcactggcc
aaaatctacatagacagcaacaacaacccagaaagatttctgcgtgagaatccctactat
gacagccgtgttgtggggaagtactgtgagaagagagaccctcatttggcatgtgtggct
tatgagcgtgggcagtgtgacttggagcttattaatgtatgcaatgaaaactccctcttc
aagagcctctcacgttacttagttcgccgtaaggatcctgaattgtgggggagtgtactg
ctggaaagcaatccttacagaagaccacttattgaccaggttgtgcagactgcattgtct
gagacgcaggaccccgaagaagtgtctgttactgtaaaagctttcatgactgctgatctt
cccaatgagctcattgaactgctggagaaaatagttcttgataactcagtgttcagtgaa
cacaggaacctgcaaaaccttctcattctcacagctattaaagctgaccgtactcgtgtc
atggaatatatcaaccgtctggataattatgatgctccagatattgctaacattgctatc
agtaatgagctttttgaggaggcttttgccatcttcaggaaatttgatgtcaacacttca
gctgtgcaggtattgattgaacacattggaaacctggatcgtgcctatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagcttgctaaagcccagcttcagaaagggatg
gtaaaagaagcaattgactcctacattaaagcagatgatccttcctcttacatggaagtg
gttcaagctgccaatgctagcggaaactgggaggagctggtgaagtacctacagatggca
cgcaaaaaagcccgggagtcctatgtggagacggaactcatttttgctcttgctaaaaca
aatcgtctagctgagctggaagaattcataaatggacctaataatgctcacatacagcaa
gttggtgatcgctgctatgatgagaagatgtatgatgctgctaagctattgtataataac
gtgtcaaactttggccgtttggcatccacattggttcacctaggtgaataccaagcagct
gttgatggtgctcggaaagcaaacagcactcgaacatggaaagaggtttgctttgcatgt
gttgatgggaaagaattccgtctagcccagatgtgtggacttcatattgtagtgcatgca
gatgaattggaagagctcatcaactattaccaggatcgtggatactttgaagagctgata
actatgttggaagcagcactgggacttgagcgtgcccacatgggaatgtttacagagcta
gcaattctctactccaaattcaagcctcagaagatgagggagcacttggaactattctgg
tccagagtcaacattcccaaggttctaagagctgcagaacaagcccatctttgggcagag
ctggtgttcttgtatgataaatatgaagagtatgataatgccatcatcacaatgatgaat
cacccaacagatgcatggaaagaaggacagttcaaagatatcatcaccaaggtggccaat
gtggagctgtattataaagcaatccagttttatttggaatttaaacccctgttgctcaat
gatctgctgatggtgctgtctccccggctggatcatactcgtgctgtaaacttcttcagt
aagactaaacagcttccacttgttaaaccctacttgcgctcagttcaaaaccacaacaac
aaatcagtgaatgagtctctgaataatctcttcattatagaagaagactatcaggctctt
aggacatctatagatgcctatgacaactttgacaacatctcccttgctcagcgtttggag
aagcacgagctgattgagttcagaagaattgctgcatatctctttaaaggcaacaatcgc
tggaaacagagtgtagaactttgcaagaaagacagactatacaaggatgcaatgcaatat
gcttcagaatccaaagatacagagttagcagaagaattgctgcagtggttcttgcaggaa
gaaaagagagaatgttttggagcttgtctcttcacctgttatgaccttctaaggccagat
gttgtcttggaaactgcatggaggcacaacatcatggattttgccatgccctactttatt
caggtcatgaaggagtacttgaccaaggttgatggaataaaggaaaaggtggataaactg
gatgcctcagagtcgctgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggtcagccacaactaatgttgacagcaggacccagtgttgcagttcccccacaggca
ccttttggctatggctacaccgcacctccatatgggcagcctcagcctggtttcgggtac
accatgtaa
DBGET
integrated database retrieval system
