Chelonoidis abingdonii (Abingdon island giant tortoise): 116827649
Help
Entry
116827649 CDS
T07367
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116827649 (VPS50)
Membrane trafficking [BR:
cabi04131
]
Protein recycling
Others
EARP complex
116827649 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
116827649
NCBI-ProteinID:
XP_032641270
Ensembl:
ENSCABG00000001918
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPPVLSLQVMEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEELLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTVSSSV
SDGNNVIGAEETNFDRSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTITLFEQYCTEGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSNDTTGTLTAAEERKEKVPSPHLSHLVVL
TSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatgactcgccagggtctcagaagtccccaggagaacgtt
catgacctcagtcctgttgagaattttcggattcctagcaaggaggagctgagagaactc
cgggaacaaccaaccgatcctcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaagtatgagttggagaagcttcctccagtt
cttagtcttcaagtaatggaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcagtcatttgcacaaatggaagg
aggcacctgaatattgcaaaggaaggctttactcaagctagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
cagttgtgcttggaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaactattagatgtagcc
ctctccaaaatatgcaagaactttgatatcaatcattataccaaggtgcagcaggcttac
agactacttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgtttcaagtagttcttgggtatgtagaactgtgcgcaggaaactcg
gacaccaaatttcagaagctacaatacaaggacctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctctgcaaagcactctgggaagtcatgcttagttattat
cgaacgatggaatggcatgagaaacatgaccgagatgagggaactgtttcatcttctgtt
tcagatggcaacaatgtgattggagctgaggagaccaattttgaccgtagctatgtacaa
aagaaattagaacatggactttcacgaatatggcaggatgtgcagctgaaagtgaaaaca
tatctgctggggacagacatgtctaacttcaaatatgatgactttatctttgtactagat
atcattagcaggctgatgcaagttggggaagaattttgtggcagtaagtcagaagttttg
caagaatccattagaaaacaaagtgttaactatttcaagaattatcacagaactcgtctt
gaagaattacgaatgttcttggagaacgagacctgggagctttgtcctgttaagtcaagc
tttagtattttacagcttcatgagtttaaattcatggagcagtcacgttccccgtctgtg
tcgcctagtaagcagcctgcttcagcaatctcaacaaccataactttgtttgagcaatat
tgtactgaaggaaatccatttgaaattcaggtcaacagcaaagatgatgagacagaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaagagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtaaaaagtgtttctcgagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgaatgcacccatcctaacaaacactacactgaatgtaataagactc
gttgggaaatacatgcagatgatgaacattctgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgtttgaatcaacaggactgggtcttagtagtagcaggctccgcactacgctaaac
aggatacaggagagcctgattgatctggaggtctctaatgataccactggcaccctcaca
gctgctgaagagagaaaggagaaagtgccaagcccacacctcagtcatctggtagtttta
acatctggcaatactctgtatggtttggcagagagagtggtagccacagaatccttggtg
tttttggctgagcagtttgagtttcttcagtcgcatcttgatgctgtgatgcctgcagcc
aagaaaccctttctccagcaattctactctcagactgtgtcaactgccagtgaactacgc
aaaccaatttattggattgtagctgccaaagctattgattatgaacagatgctgctcctc
atggctaacgtaaagtgggatgtgaaagagatcatgtcacaacataatatctatgttgat
gctcttttaaaggaatttgaacagtttaacagaaggttgaatgaggtgtctaaaagagtc
cgtattccattgccagtgtcaaatattctttgggagcactgtatacgactagccaataga
actattgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatg
cagttggacttccagcagtttttaatgaaactagaaaagctaacagacattaggcctatt
ccagataaggaatttgtggagacctacattaaagcttactatctgactgaaaatgacatg
gagcgttggatcaaggagcacagggaatattccaccaagcagttgactaatctggtgaat
gtttgtctgggatcacacatcaacaaaaaagcaagacagaaactgctagcagcaattgat
gacatagacagacctaaaagataa
DBGET
integrated database retrieval system
