Chelonoidis abingdonii (Abingdon island giant tortoise): 116827903
Help
Entry
116827903 CDS
T07367
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04137
Mitophagy - animal
cabi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116827903 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116827903 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116827903 (AMFR)
Enzymes [BR:
cabi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
116827903 (AMFR)
Ubiquitin system [BR:
cabi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116827903 (AMFR)
Multi subunit type E3
ERAD complex
116827903 (AMFR)
LMBR1L-GP78-UBAC2 complex
116827903 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_4
Prok-RING_4
RING_XB3-XBAT31
zf-RING_Vps41
SHOC1_HhH_tandem
RING_Ste5
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
116827903
NCBI-ProteinID:
XP_032641665
UniProt:
A0A8C0GV26
LinkDB
All DBs
Position
19:7708630..7752550
Genome browser
AA seq
548 aa
AA seq
DB search
MLIAKLIQCAVFGPLRVSEKQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLTLLIAMLLSCCGLAVICGVIGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQTARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDNHRVREDHQ
RENLDENLVPVAVAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNS
QLNAMAHQIQEMFPQVPYHIVLQDLQLTRSVEITTDNILEGRIQVPFPTQRPDSVRPATN
SPVERHNSDQEEAETATQTERVPLELSPRLDDMVEFSEMESEPSETEDFEARGSRFSKSA
DERQRMLVQRKEDLLQQARKRYLNKTPDEDSTSESPFQSEGAASDPVTVRRRMLAAAAER
RLQMQQTS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgctaaactaatccagtgtgcagtgtttggtcctcttcgtgttagtgagaag
cagcatctcaaggacaaattctggaatttcatcttctacaagtttatctttatttttggt
gtgctgaatgttcagacagtggaagaggtggtcatgtggtgcctctggttctctgggctt
gtgtttctccacctcatggttcagctctgcaaggatcgatttgaatatctttccttctct
cccaccaccccaatgagcagccacgtcagagtcctgactctgctgattgccatgttactc
tcctgttgtggtctagcagttatctgtggtgttatcggctatacgcatggaatgcacact
ctagctttcatggcagcagagtctctacttgtgacagtgagaactgctcatgtgatttta
cgttatgtaattcatctctgggatctcaaccatgaaggaacctgggagggcaagggaaca
tatgtgtattatacagattttgtcatggagctaaccttgctttcactggacctgatgcat
catattcacatgctgctgtttggcaatatctggttgtcgatggccagcctggtgattttt
atgcagctgcgttatttgttccatgaggttcagcgtagaatccgtcgtcacaagaactac
ttgcgtgtggttggaaacatggaagctaggtttgcagttgcaactcctgaagagctagct
gtcaataatgatgactgcgccatttgctgggactccatgcagactgcccgtaaactccca
tgtgggcatctcttccacaactcatgcctgcgttcctggcttgaacaggatacatcctgc
cccacctgcagaatgtctctcaatatcactgacaaccaccgagttagggaggaccaccag
agagagaacctagatgaaaacttggtacctgtggcagtggcagaaggcagacctcgcttg
aaccagcacaatcacttcttccactttgatggctctcgtatcgctagctggttgcccagt
ttttcggtggaagtgatgcacactactaatatcctgggtattgcgcaagcaagcaactca
cagctcaatgctatggcccatcagattcaagagatgttccctcaggttccttaccatata
gttctacaggatctgcagctgacacgctcggtagaaataacaactgacaacatcttagag
gggcgcatccaggtacctttcccaacacagcgtccagatagtgttaggcctgcgacaaac
agtccagtggaaaggcataattccgatcaggaggaagcggaaactgctacccagactgag
agagtgccacttgaactcagtccgagactggacgacatggtggagttcagtgaaatggaa
tcagagcccagtgagacagaggattttgaggccagaggaagtcgcttctccaagtcagct
gatgaaaggcagcgtatgttagttcagcggaaggaagacctgctgcagcaagctcgcaag
cgttatttaaacaaaacccccgatgaagactcaacctccgagagcccctttcagtctgag
ggtgctgcttctgaccccgtcaccgtgcgccgcagaatgttagccgctgctgccgaacgg
agactgcagatgcaacagacctcttag
DBGET
integrated database retrieval system
