Chelonoidis abingdonii (Abingdon island giant tortoise): 116827916
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Entry
116827916 CDS
T07367
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116827916 (SOX13)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116827916 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116827916
NCBI-ProteinID:
XP_032641696
Ensembl:
ENSCABG00000010284
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MMSMRNPVSPHLELDGAGSMVNCTIKTEEKTDSCHESPQGAPTGSDPHSSDLHGVPLSLR
ESADPRTLPQESRSPVSNALDSRRSAFEPAVSSQEKLDFNRNLKEVMPTIEKLLSSDWKE
RLLGRNTMESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQ
QQMELARQQQEQITKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDS
QLALPIQPIPCKPVEYPMQLLHSPAPPTLKRPAGSGHLQMQESSQPLNLTAKPKNSELSS
ASSSPSLKMSSCRSLTPNHGVTRDLQSSPPTLPLGFLGEGDAITKALQDARQLLHCHSGA
TESSLNNPYRKDQMGLDSSPTKERMEETCMHRLDESMLTCDMDGSRHFPESRNNNHIKRP
MNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEK
YPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDTRQSYLIAPQSSQMQASSSDVLYQ
RPMGMQLAPPLVEHYLPRSMDPNMPVIVNTRSLKSQEGDGGEDGHSVADGEMYRYSEDED
SEGEDKSDGELVVLTD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccatgaggaaccctgtttctccccacctggaacttgatggagccgggagcatg
gtgaactgcaccatcaagacggaagagaagacagatagctgccatgagtcccctcaggga
gcacccactggctctgatccccactccagtgatttgcatggagtgccactgtctctgaga
gagagtgctgacccccggactcttccacaggaatcccggtctcctgtgagcaatgcttta
gattccaggaggtctgcgtttgagcctgctgtcagcagccaggaaaagttagacttcaac
agaaacttgaaagaggttatgccaaccattgagaagttactctccagtgactggaaagaa
agacttctgggtagaaacaccatggaatccaaagaggtgaaaggaacccaggaaagctta
gcggagaaggagcttcagttgcttgtcatgatcaaccagctctccaccttgcgggaccag
cttctgacggctcattcggagcagaagaacatggcagccatgctgtttgagaagcagcag
cagcagatggagctggctcggcagcagcaggagcagattaccaagcagcagcagcagctc
attcagcagcagcacaagattaacctgctgcagcaacagatccagcaggtcaatatgccc
tatgtcatgattccagcctttcctcccagccaccagcctctccctgtgaccccagactcc
cagctagcgcttcccatccaacccatcccttgcaaaccagtggagtaccccatgcagctt
ctgcacagccctgcccctccgacgctgaagagacccgccggctcaggccacctccagatg
caggagtcttcacagccactgaacctaacggccaaacccaaaaactctgagctctccagt
gcctccagctcacccagcctgaagatgagcagctgccgatccctcactcctaaccacggg
gtcacgagagaccttcagtccagccctcccactctgcctctgggatttctgggagagggg
gacgccatcactaaagcgctccaggatgcacggcagctcctgcactgccacagtggggcg
acggagagctctctcaataatccctaccggaaggaccaaatgggcttggattcctcaccc
acaaaggagcggatggaggagacatgcatgcacagactggacgagtccatgttaacctgc
gatatggatggatcacgacacttccccgagtccaggaataacaaccacataaagcggccc
atgaatgctttcatggtgtgggccaaggacgagaggcggaagattttgcaggccttcccg
gatatgcacaactccagtatcagcaagatcctggggtcccggtggaaatcgatgacgaac
caagagaagcagccctattacgaggagcaggcgcggctgagccggcagcacctggagaag
tatcctgactacaaatacaagccgcggccaaagcgcacctgcatcgtggaggggaagcgg
ctgcgcgtgggcgagtacaaggcactgatgaggaacagacggcaagacaccaggcagagc
tacttgatagcgccccagagcagtcagatgcaagcctcttcatcagatgtcctgtaccag
aggccaatgggcatgcagctggctccaccactagtggagcactacctgccccgcagcatg
gaccccaacatgcccgtcatcgtcaacacacgcagcctcaagtcgcaagagggtgacggt
ggggaggacgggcactcggtggcggatggcgagatgtaccggtacagtgaggacgaggac
tccgagggcgaggacaagagcgatggggagctggtggtgctcacagactga
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