Chelonoidis abingdonii (Abingdon island giant tortoise): 116827917
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Entry
116827917 CDS
T07367
Symbol
SNRPE
Name
(RefSeq) small nuclear ribonucleoprotein E isoform X1
KO
K11097
small nuclear ribonucleoprotein E
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116827917 (SNRPE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116827917 (SNRPE)
03041 Spliceosome [BR:
cabi03041
]
116827917 (SNRPE)
03032 DNA replication proteins [BR:
cabi03032
]
116827917 (SNRPE)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116827917 (SNRPE)
Spliceosome [BR:
cabi03041
]
Complex A
U1 snRNP components
Sm proteins
116827917 (SNRPE)
U2 snRNP components
116827917 (SNRPE)
Complex B
U1 snRNP components
116827917 (SNRPE)
U4/U6.U5 tri-snRNP components
116827917 (SNRPE)
Complex C
U2 snRNP components
116827917 (SNRPE)
DNA replication proteins [BR:
cabi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116827917 (SNRPE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
116827917
NCBI-ProteinID:
XP_032641704
LinkDB
All DBs
Position
Unknown
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKARKQLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcgcgggcagggccagaaggtgcagaaggtgatggtacagcccatcaacctc
atcttcaggtacctgcagaataggtccaggattcaggtgtggctctatgaacaggtgaac
atgcggatagaaggctgtatcattggttttgatgaatacatgaacctggttctggatgat
gcagaggagatacactcaaaaacaaaagcaaggaaacagctgggtcggatcatgttaaag
ggggacaatattactcttctacaaagtgtttctaactag
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