Chelonoidis abingdonii (Abingdon island giant tortoise): 116827988
Help
Entry
116827988 CDS
T07367
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116827988 (SSRP1)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116827988 (SSRP1)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
116827988 (SSRP1)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
116827988 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
SSRP1_C
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116827988
NCBI-ProteinID:
XP_032641822
Ensembl:
ENSCABG00000010808
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMVRDAGNLESHSFLGVGSRESGKNDGRLRLSRQGVIFKNSKTG
KVDNIQASELAEGIWRRVALGHGLKLLTKNGHVYKYDGFRESEFDKLSEFFKSHYRLELA
EKDLCVKGWNWGTVKFGGQLLSFDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEV
SLMEVRFYVPPTQEDGVDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRI
YPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFS
KDEDISLTLNMNEDEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGA
QCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQG
TQYTFSSIEREEYGKLFDFVNAKKLNIKNRGHKESMPQSYDEYADSDEDQHDAYLERMKE
EGKIREENADDSSDESGEETDESFNPGEEEDDVAEEFDSEVSASSDGGSDREEKRKPAKK
ARIVKERKPRKKPSESKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAG
ELWKGMSKEKKEEWDRKAEDAKRDYEKAMKEYSEGGKSESSKKERSKKKQQQQQQQGKGK
AERKAAPSKALAKSPAKQLGESFKSKEFVSSEESSGDNKKEDSEEEEIASTPPSLEDSAS
GSE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacgctggagttcaacgaaatataccaggaggtgaaggggtccatggtgaga
gatgcaggaaacctggaaagccattccttcctgggggtgggaagcagagaatctgggaag
aatgatgggcgactgcgactgagccgccagggcgtcatcttcaagaacagcaagacaggc
aaggtggacaacatccaggcctcagagctagcggagggcatctggcgccgggtggcacta
ggccatggcctcaagctgctcaccaagaatggacacgtctacaagtatgatggcttcagg
gaatcggagtttgacaagctgtcagagttcttcaagtcccattatcgtctggagctggcg
gagaaggatctgtgtgtgaagggctggaactgggggactgtgaagtttggaggccagctc
ctgtccttcgacatcggggagcagcccgtgttcgagatcccactcagcaatgtgtcccag
tgcaccacaggcaagaatgaggtgacattggagttccaccagaatgacgatgccgaggtg
tcactcatggaggtgcggttctacgtgccacccacgcaggaggatggcgtggaccctgtg
gaggcctttgcccagaatgtgctgtccaaggcagacgtgatccaggcgaccggggatgcc
atctgcatcttccgggagctgcagtgcctgacaccacgtggtcgctatgacatccgcatc
taccccaccttcctgcacctgcacggcaagacctttgactacaagatcccctacaccacc
gtgttgcgcctcttcctgctgccccacaaggaccagcgccagatgttctttgtgatcagc
ctggaccctccgatcaagcagggccagacacgctaccacttcctgattctgctcttctcc
aaagacgaggacatctccctgacccttaacatgaacgaggatgaggtggagaagcgattc
gagggccgactcaccaagaacatgtctggctcactctatgaaatggtcagtcgggtcatg
aaagcgctggtgaaccgcaagatcaccgtgcccggcaacttccaggggcactcgggagcc
cagtgtatcacctgctcctacaaggccagctcggggctgctctacccgctggagcgtggc
ttcatctatgtgcacaagcccccggtgcacattcgcttcgacgagatctccttcgtcaac
ttcgcccgcggcaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggc
acacagtacaccttcagcagcatagagagggaggagtatgggaagctgtttgactttgtc
aacgccaagaagctaaacatcaagaaccgaggccacaaggagtccatgccacagagctat
gatgaatacgctgactctgacgaagaccagcatgatgcctacctggagaggatgaaggag
gagggaaagatccgggaggagaatgctgatgacagcagtgatgagtctggggaggagact
gatgagtcgtttaaccctggggaggaggaggacgacgtagcagaagagttcgacagcgaa
gtctctgccagtagtgatggtggcagcgaccgtgaggagaagaggaagccagccaagaaa
gccaggattgtcaaggagcgcaagccccgcaagaagccgtcagagagtaagaaagggaaa
gaccccaacgccccgaagaggcccatgtctgcctacatgctgtggctgaatgccagccgc
gagaagatcaagtcagaccaccctggcatcagcatcaccgacctgtccaagaaggctggg
gagctctggaagggcatgtccaaggagaagaaagaggagtgggatcgcaaggcggaagat
gccaagagggactatgagaaggccatgaaggagtacagcgaggggggcaaatcggagagc
tccaagaaagagagatccaagaagaagcagcagcagcagcagcagcaggggaaggggaag
gcagagaggaaagcggcaccgtccaaggccctagccaagtcccccgccaagcagctgggc
gagagcttcaagagcaaagagtttgtctccagtgaggagagctctggtgacaacaagaag
gaggactcggaggaggaggaaatcgccagcacgccccccagcttggaggactcagcatct
ggctcagaatag
DBGET
integrated database retrieval system
