Chelonoidis abingdonii (Abingdon island giant tortoise): 116827995
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Entry
116827995 CDS
T07367
Symbol
SOX21
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cabi03000
]
116827995 (SOX21)
Transcription factors [BR:
cabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116827995 (SOX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116827995
NCBI-ProteinID:
XP_032641838
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLADPDHPHGLKAAGLHGGAGG
GLVPDSLLANPEKAAAAAAAAPPGLLPQSAAAAAAAAAPRRQQPLYGCWNLGSKMEEASP
SSASASPYALPWRLPRRRRSGTFHGPAPPRAAAAAAGGHTHSHPSAGNPGYMIPCNCSAW
PSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgtcaagaggcccatgaacgccttcatggtgtggtcccgg
gcgcagcgccggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggggccgagtggaagttgctcaccgaggccgagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcatcccgactacaagtaccggccccgc
cggaagcccaagaccctgcttaagaaggacaagttcgccttccccgtgccctacggcctg
gcggatcccgaccacccgcacgggctgaaggcggccgggctccacggcggggccggtggg
ggcctggtgcccgactccctgctggccaacccggagaaagcggccgccgccgccgccgca
gcgccgccgggtcttcttccccagtcggcggccgccgcagccgcagccgccgcgccgcgc
cgccagcagcccctatacggctgctggaacctggggtccaaaatggaagaggcgtcgcct
tcctccgcctcggcgtctccctacgccctcccctggcgcctaccccgtcgccgccggagc
ggcaccttccacgggcccgcgccgccgcgagctgccgccgccgccgccggggggcacact
cactcgcacccgtccgcgggcaacccgggctacatgatcccctgcaactgcagcgcctgg
cccagcccgggcctccagccgcccctcgcctacatcctgctgccaggtatgggcaagccc
cagctggacccgtacccggcagcctacgcggcggcgctatga
DBGET
integrated database retrieval system
