Chelonoidis abingdonii (Abingdon island giant tortoise): 116828093
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Entry
116828093 CDS
T07367
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116828093 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116828093 (TAF5)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116828093 (TAF5)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116828093 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
116828093 (TAF5)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116828093 (TAF5)
STAGA complex
116828093 (TAF5)
TFTC complex
116828093 (TAF5)
SAGA complex
116828093 (TAF5)
SLIK complex
116828093 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
DSE1_N
PAC11
Beta-prop_SCAP
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
LisH_TPL
LisH_PAC1
VID27
Motif
Other DBs
NCBI-GeneID:
116828093
NCBI-ProteinID:
XP_032641978
UniProt:
A0A8C0IS83
LinkDB
All DBs
Position
16:complement(2835256..2857093)
Genome browser
AA seq
777 aa
AA seq
DB search
MAALPEEPAEVVVKPDPDGGILPQPPPTPPPAAPPTTAPAEGEAVGAPGSGGEAAPSKPA
PPDPAASPGPTDRQTLLAVLQFLRRNNLHESEDILRREARLLGEEVAAVALSPAGPGAQG
TPGGETDATGGEALLSRVAAASGAAGGGVAAGASATAAAPPGKVGGVPAEDQPDVSAVLS
AYKQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSF
FEKFHGDQECYYQDDLRVLSGLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQE
KQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEIE
VPLDDEDEEGENEEGKPKKKKPKRESMGSKSKKQDPNAPPQTRIPLPELKDSDKLDKIMN
MKEATKRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKK
LRSVKSATDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSE
DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF
AGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF
LATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDNTVRLWDAVRV
FEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFTRRNLLLASGAYSPQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctacctgaggagccggctgaagtggtggtgaagccggacccggacgggggt
atcctgccgcagccccctccgactcccccgcccgccgctccccccaccacggcgccggcg
gagggggaggcggtgggggctccggggagcggaggggaggccgctccctccaagccggcc
cccccggatccggccgcctcccccggccccacggaccggcagaccctcctggccgtgctc
cagttcctgcgtcgcaacaacctccacgagtccgaggacatcctgcgccgggaggcccgc
ctgctgggggaggaggtggccgcggttgccctcagtcccgcgggacccggcgcccagggg
acacctggtggagagacagacgccaccgggggtgaggcgctactcagccgggtcgccgcc
gcctccggagcggccggagggggcgtcgctgctggtgcctctgcgactgcagcggcgccg
ccagggaaagttggaggtgttcctgcagaagatcagccagatgtcagtgcagtgttgtct
gcctacaaacagcagggggacccagcgctgtacgaggaatactacagtggactgaagcac
tttattgagtgtgccctagactgtcatcgggctgaattatcccagttgttttatcctctc
tttgtacatatgtatttggaattggtctacaaccagcatgagaatgaagccaagtctttc
tttgaaaagtttcatggggatcaagagtgttattaccaggatgacttgcgtgtattatct
ggtttaaccaaaaaggagcacatgaaagggaacgagaccatgctggatttccgaacaagc
aagtttgtgctgcgcatttctcgtgactcttatcaactcttaaagaggcatcttcaggaa
aaacagaacaatcaaatctggaacattgttcaggagcatctgtacattgatatctttgat
ggaatgccgcgcagtaaacaacagatagatgctatggtgggaagcttggcaggggaggct
aaaagggaggctaataaagcaaaggttttctttggcttattaaaagaaccagagattgag
gtgcctttggatgatgaagatgaagagggggagaatgaggaaggaaaaccaaaaaagaaa
aaacctaaaagagagagcatggggtcaaaaagtaaaaagcaagaccccaatgctcctcca
caaaccagaattcctcttcctgagctgaaagactctgacaagttggataaaataatgaat
atgaaggaagccacaaaacgtgtgcgtcttggtccagaatgtttgccttccatctgtttc
tacacattccttaatgcctaccagggtcttactgcagtggacatcactgatgactctagc
atgattgtaggaggctttgctgactccactgtaagagtatggtctgtgacaccaaaaaag
ctacgcagcgtgaaatcagcaacagatctcagtctcatagacaaagaatcagatgatgtc
ttggagaggatcatggatgagaaaacagcaagtgagttgaagattttatatggtcacagc
ggacctgtctatggtaccagcttcagtcctgataggaactacctcttgtcctgttcagag
gatggcactgtcagattgtggagccttcaaacattcacttgcctcgtgggatataaagga
cacaactatccagtgtgggatacacagttctctccctatggatattactttgtatcaggt
ggacatgacagagtggctcgcctgtgggctacagatcactaccagcctttacgaatattt
gctggtcatcttgctgatgtcacttgtacccggtttcaccccaactccaactacattgcc
acgggctcagcagacaggactgtacgactatgggatgttctgaatgggaactgtgtaaga
atctttaccggacataagggaccaattcattcactggcattttctcctaatggacgattc
ctggctactggagcaacagatggaagagtgcttctctgggatattggccatggtttgatg
gtgggagagttgaaagggcacactgatacagtctacgcactcagattcagtagagatggg
gaaattttagcatcaggttcgatggataacacagtccggctgtgggatgctgtgagagta
tttgaagacttagaaactgatgattttactacagccactggacatataaatctgcctgaa
aactcacaggacttgctgttgggtacatacatgaccaaatcaaccccagtcatacacctc
cattttacccgcagaaatttgctactagcttcaggagcatatagtccacaataa
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