Chelonoidis abingdonii (Abingdon island giant tortoise): 116828108
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Entry
116828108 CDS
T07367
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116828108 (COL17A1)
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GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116828108
NCBI-ProteinID:
XP_032642006
LinkDB
All DBs
Position
Unknown
AA seq
1508 aa
AA seq
DB search
MDSVTKKTKRDGTEVTERLITESVTTRLTSLPPKGGSGTGHKTAHGGGSGMEKRTFTHGS
SYVTSSGSGRMNSSSSSGYRQTPSPCSTLPKSPGSTFERKTYVTRNATYEGSSSANSSPE
FPRKEFASSNTRGRSQSRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRSSS
STLPIPKKAVVETKMVTESSQSVSGTYDTTILNAALPPYMWSSTLPAGSSLGSYHNNMAQ
GSSLLNTMSHSTGSVFGVPNNLAPGSSTLNTGLSSSSTVFGVQNNLAPSSAAMTHSATTA
STVYGVKKNTSQSTGMAGSGVCTSTVGSTVNSQSDDILRKDCKFLLLEKENVPAKKEMEL
LIMTKDSGKVFSASSTGLSGTSFAEDTLKKEKQGFSSSYAADSYLKSETNGGLKSVSTKD
KATYAEIGGDHGGGGIGAAPAWCPCGSCCSWWKWLLGLLLAWLFLLGLLFGLIALAEEVK
KLKSRVENLEKTQANYLIINPHDGDINQQYRFSDVGKSPDYATGFSHKDQEALWLFMRSK
MALERGQGFFRGEKGEPGLKGDMGMKGPKGDQGLPGAPGIPGSIGHPGPEGPKGQKGSMG
DHGMEGPTGQRGREGPPGPRGEPGLPGFGEKGDRGAVGDQGPAGPPGPPGSVGLKGMTGS
PGPQGPPGSPGLQGFRGEAGLPGAKGEKGALGAPGPKGDHGEKGPRGLTGEPGSRGLPGL
PGEPGAKGSVGPAGPDGHQGPRGEQGLMGMPGLQGPPGPTGDAGQPGLTGPQGPPGLPGN
PGPPGTKGEPGAPGRVITAEGSSTIALPGPPGPPGAVGPPGPPGVPGPVGPAGLPGLQGP
RGERGLAGETVMETIRSEVATSLSQISSDLMGRAGPPGPPGPPGASIQGPPGPRGPAGEG
LPGPPGPPGRPGSFVPNSETFFAGPPGPPGPPGPKGDQGSPGPRGFTGEPGQPGLPGISA
SGAGVAIQGPPGPAGPRGPKGDKGDAGVPGAPGIPGGSSTGGSSNSRHSQGPPGPPGPRG
PPGPAGGSLQEIQQYVAEYLQSDTIGRYLIGPQGPPGPPGPPGIITTIDGQSLDYAELAK
RVMSSMTSSGYNIEMSSSSSSSSSRFLTYEDILAMLQREEVRQYLVGPQGPPGPPGPGGD
GLALSLNYDELTSRVISYITNNGLSIGLPGPPGPPGLPGTSYSDLIALLQGSEFSGIVGP
PGPQGPPGVPGAPGIPGMPGSSLSTFSLEDVTSYLQSVGYASVSGPPGPPGPPGPPGPPG
LSGTGHFSYTDNVLSDTFRSELIQYLTSDDVRRFISGPPGPPGPMGPPGPKGDSGLMAGS
YGGSLGADGSYGGSLGAGGLYGGAMGSDGSYGGSMGTGGSYSGSLGAERAERRSMSSSGS
YSESFVGSLDYNELALRVSESIQSRGLLRDMVTYATQGPPGPPGPPGISRVFANYGNVTE
DLVDFFRTYGTIPGPPGPKGEMGYPGPKGETGPMGPPGPQGPRGPKGEKGEKGEQVFVGR
RKRRSVGV
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggactcagtaacgaagaaaaccaaacgggatggaacagaagtcaccgaaagacttatt
acagagtcagtaaccacaagactgacgtccttaccaccaaaaggagggagcggcactggg
cacaaaacagcccatggcggagggagtggaatggaaaagaggactttcacccatggcagc
agctacgtgacttcaagtggaagtggtcgaatgaattcgtcctcctcctccggctacagg
caaaccccttctccctgctctactctccccaaatcacctggctcaaccttcgaaagaaaa
acctatgtcacccgcaatgcaacatatgaagggagctccagtgcaaattcttctcctgaa
ttccctagaaaagagttcgcatcgtccaacaccagagggcggagtcaaagccgagagagt
gaaatccgagtacgactccagagcgcttctccttcgaccagatggaccgagctggatgat
gtgaagcgtttgctgaaggggagtcgatcagccagcgtcagccccacacgatcgtcatcc
agcactctccccatccccaagaaagctgtagtggaaacgaagatggtgactgagagttcc
cagtcagtgtcagggacatacgacacaaccatactgaatgccgccctccctccatacatg
tggtcctccaccctgcctgcagggtcttcccttggcagttaccacaacaacatggcccag
ggctcttccctgctcaacaccatgtcccattcaacaggatcagtgtttggcgtcccaaat
aacctggctcccggctcttccactctgaacacagggctgagcagttcctcaacagtgttt
ggtgttcaaaacaacctggctccaagctctgcagccatgactcatagtgcaaccacagcc
tccacagtatacggagtgaagaaaaacacttcccaaagcactggtatggctggtagtgga
gtgtgcacttcaactgttggcagcactgtgaactcccagagcgacgacatcctgcgtaaa
gactgcaagttcctgctgctggagaaagagaacgtccctgccaagaaggagatggagctc
ttgatcatgacgaaggacagcggcaaggtcttcagtgcttccagcacggggctcagtgga
acgtcctttgcggaagacaccttgaagaaagaaaagcagggcttctcttcctcttatgct
gcagactcctacctgaaatctgaaacaaatggaggtctaaaatccgtgtcaacaaaggac
aaagcaacttatgcagaaattggaggcgatcatggagggggagggataggggcagcccca
gcttggtgtccctgtggttcctgctgtagctggtggaaatggctcctgggtttgctcctg
gcctggctgttcctccttggattgctcttcggactcatcgctttggcggaagaagtgaag
aagctaaaatctcgtgtggaaaacctggagaaaacccaagctaactacctgataattaat
ccacacgatggggatattaaccaacagtaccgattttctgatgtcgggaaaagtccagac
tatgctacaggtttcagtcataaagatcaagaggctctctggctgtttatgaggagcaaa
atggctttggaaagaggacaaggtttcttccgaggggagaaaggggaacctggtctgaaa
ggcgatatgggaatgaaaggtcccaaaggagatcaaggacttcctggtgcaccaggcatc
ccaggttcgattgggcacccaggacccgagggaccaaaaggacagaaaggcagcatgggt
gatcatggcatggagggacccacgggccaaagagggcgagaagggccaccaggacctcgt
ggggaacctgggctacctggatttggggagaaaggagacagaggtgctgttggtgatcag
ggacctgcaggaccgcctgggccaccagggtctgttggcctcaaaggcatgacaggttct
cctggcccacaaggtccacctggttctcctggtcttcaaggatttagaggtgaagcaggt
ctcccaggggccaaaggtgagaaaggagctttgggagcacctggacccaaaggtgaccat
ggagagaaaggacctcgtggtctgacaggcgagccaggctcaagaggattgcctggtctt
ccaggggagccaggagctaaaggatctgtaggtccagctggccccgacggacaccaaggc
ccaagaggggaacaaggtctcatgggaatgccaggattgcaaggaccgcctgggcccact
ggagatgcaggacagccaggtctcacaggaccgcagggacccccaggactcccaggcaac
cctggtccaccagggactaaaggtgaacctggtgctcccggccgagttataactgctgag
ggctcatcaactattgctctccctggccctccaggcccaccaggagcagtcggcccaccg
ggcccacctggtgtcccaggtcccgttgggccagctggtctccccggattgcaaggtcca
cgtggcgaaagagggctcgcaggtgaaaccgttatggaaaccatcagatcagaagttgca
acttcattatctcaaatttcatcagatttaatgggacgagcaggcccccctggccctcca
ggacccccaggcgcttccatccagggaccacctggacctcgcggcccagcaggagaagga
ttaccaggcccaccaggcccaccaggaagaccaggctccttcgtgcccaactcagaaaca
ttctttgcaggcccaccaggtccaccaggcccaccagggccaaagggagaccaaggttca
ccgggcccacgaggattcacaggtgaaccaggtcagcctggcctcccaggaatctctgct
tcaggtgctggagttgccatccagggacctcctggacccgcagggcctcgaggacccaaa
ggagacaaaggtgatgcaggcgtgccaggggctcccggcatcccaggagggtcttcaaca
ggcggatcttcaaactcaagacacagccagggtccaccaggtcctcccggccctcgcggt
ccccccggcccagctggaggctcactgcaggagattcagcagtacgttgcggagtacttg
cagagtgacaccattgggcgttatctgattggacctcaaggcccaccaggaccccctggg
ccaccaggaatcatcaccaccattgacggacaatctttggactatgccgagctggccaag
cgtgttatgagctccatgacgagctccggttacaatattgagatgtcaagctcttcatcc
tcctcctcctcaagattcctgacttacgaagacatcctggccatgctgcagagagaagaa
gttcgtcagtatctagttggaccacaggggcccccaggcccacctggacccggaggagat
ggcttggctctgtcactgaactatgacgagttgaccagccgggttataagctacataaca
aataatggactcagtattggactcccgggacccccaggtcctccaggattacccggcaca
tcttacagtgacctcatagctttactccaaggctctgaatttagtggcattgttggaccc
ccagggccacagggaccccctggagttccaggagcccctggaatccccggaatgccgggc
agctccctctccacgttcagcctagaggatgtcacctcttacctgcaaagtgtgggatac
gcttccgtctctggaccaccaggacccccaggacctccagggccaccagggccaccaggt
ctgtcaggaactggccacttctcctacactgacaacgtgctgagcgacacatttaggagc
gagctgatccaatatctaaccagtgatgatgttcgaaggttcatctcgggacctcccggg
cccccagggcctatgggcccaccagggccaaaaggagatagcggcctcatggctgggtcc
tatggaggatccttgggtgcagacggatcatatggtggatccctgggtgcaggaggattg
tacggtggtgccatgggcagcgatgggtcgtacggtggctcaatgggtacaggtggatcg
tacagcggatccctgggagcagaaagagcagagaggagatccatgagttcgagcggatcc
tacagcgagtcatttgtcggatcgctggattacaatgagctggcacttcgggtgtcggag
agcatacagagccgaggcctcctccgggacatggtcacttacgccacacaagggccacca
ggacccccggggccgcctgggatcagcagggtgtttgcaaactatggcaacgtcaccgag
gaccttgtggatttcttcagaacatatggtaccatcccagggccacctggtccgaaggga
gagatgggctacccagggcccaaaggtgagactggaccaatggggcctccaggaccccaa
ggacccaggggcccgaagggggagaaaggagagaaaggtgaacaagtatttgttggcaga
agaaaaagaagaagcgttggggtctaa
DBGET
integrated database retrieval system
